New model in OGS2.0 | DPOGS210715  |
---|---|
Genomic Position | scaffold2067:+ 571-5557 |
See gene structure | |
CDS Length | 2028 |
Paired RNAseq reads   | 5082 |
Single RNAseq reads   | 12636 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006327 (5e-23) |
Best Drosophila hit   | multiple ankyrin repeats single KH domain, isoform B (0.0) |
Best Human hit | ankyrin repeat domain-containing protein 17 isoform a (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to ankyrin repeat domain protein 17 isoform a [Apis mellifera] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to ankyrin repeat domain protein 17 isoform a [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0005634 nucleus GO:0003723 RNA binding GO:0044419 interspecies interaction between organisms GO:0005737 cytoplasm |
InterPro families    | IPR002110 Ankyrin repeat IPR020683 Ankyrin repeat-containing domain |
Orthology group | MCL10438 |
Nucleotide sequence:
ATGGAGGCCGCGAGTGCCGGTCACGTGGACATCGTGAGGCTGCTGGTCGCTCACGGCGCC
GACGTCAACGCTGTCTCGGGCTCCGGGAACACGCCCCTCATGTACGCCTGCGCCGGCGGA
CACGAGGACTGCGTGCGGGCGCTGCTCGATAACGGGGCCAATGTAGAAGATCACAACGAA
AACGGTCACACGCCGCTCATGGAGGCCGCATCAGCCGGTCACGTGGGCGTCGCGAAGATC
TTGCTGGAGCACGGCGCCGGCATCAACACGCACTCCAACGAGTTCAAGGAGTCCGCCCTC
ACGCTCGCATGCTACAAGGGTCACCTGGACATGGTCAGGTTCCTGTTGGCGGCCGGCGCC
GACCGCGAGCACAAGACTGACGAGATGCACACCGCCCTCATGGAGGCCAGCATGGACGGA
CACGTCGAGGTCGCCCGGCTGCTGTTGGACTCTGGAGCACAGGTTAACATGCCGACGGAC
AGTTTCGAGTCTCCGCTGACCCTGGCGGCGTGCGGGGGACACGTGGAGCTGGCTATGTTG
CTGTTGGAGAGAGGCGCCAACATAGAAGAAGTCAACGACGAGGGATACACGCCGCTCATG
GAGGCAGCTAGGGAAGGTCACGAGGAGATGGTGGCGCTGCTGCTCGGTCAGGGCGCGTCC
ATCAACGCTCAGACCGACGAGACGCAGGAGACGGCCCTCACCCTGGCCTGCTGCGGCGGC
TTCCTCGAGGTGGCGGACTTCCTCATCAAGGCGGGGGCGGATGCGGAACTGGGAGCTTCC
ACGCCGCTCATGGAGGCCTCGCAGGAAGGACACCTGGAGCTCGTACGATACCTGCTGCAA
GCCGGCGCGGAGGTCCACGCTCAGACGCAGACGGGCGACACGGCGTTGACGTACGCGTGC
GAGAACGGACACACGGACGTGGCGGACGTGCTGCTGCGGGCCGGGGCGCTGCTGGAGCAC
GAGAGCGAGGGAGGCAGGACGCCGCTCATGAAGGCCTGTCGCGCCGGACATCTCTGTACC
GTGCAGTTCCTCGTGGGCAAGGGTGCTGACGTGAACCGCATGACGGCCAACGGGGATCAC
ACGCCGCTGTCGCTGGCGTGCGCCGGCGGACATGCGGACGTGGTGAAGTTCCTGCTGGCG
TGCGACGCCGACCCCTTCCGCAAGCTCAAGGACAACTCTAGCACACTCATCGAGGCGGCC
AAGGGCGGACACACCACCGTCGTGCAGCTGCTGCTAGACTACCCCCACTCCCTCATGTTG
CCCAGAGGTAACACGGGTACGGAGGAGAGCGGGGGTCTGAGTTCCGCACAGGCGGCGGCG
CTCGGCCTGAGTCACGCCCCGGCGCCGGGCGCGCCCAGCCAGCGAGCGCTGCTCCCCGCG
CACGCACCCCCCTCGCACCCTCACGCACATGCCCACCCTCACGCGCACCCCCCGCCGCAC
GCGCATCCCTCGCACGCCGCTCACCCCGCGCATCCTGCTCACCCCGCCCTCCCCGCGGCC
GCGCCGCAGCAGGACGTGCCTCCCAACTTCGCCAAAGTCTATTTGGACGGAAGAAAGAAA
CAGGCGAGCGGCAACGGCACGGTCCAGCCGGGCGTCCCCGCGCACCCCCCGGCCGGGGCG
GCGGGCGCGGGAGGGGCCGGCAAGCACAAGTGCGGCCGCAAGCAGCGTCCCGCCGCGCCG
CACTCCGACCACCACCTGCCGCCGCCGCCCGACATACTGGAGGACCATATGTGCAACCAC
GACGTGGTGCACAAGCATAAGCTATCCCTCCCGCCCGGCTTTACTTGGAAGGATGTTAAC
AAGAAATTTAAAAATAAAAACAAAGTCGAAAAAACATGCAATAGGGCGGAGGCGCTCGCC
GGTCAGCCGAGGAATGAATCACTGCCACCGACTGAGAGGACGATGCTGGAACTAGCCGAC
GCCTCCGGTCCACCGACTCTCGCCTCGTCAGCTCTGCACGCCCTCGACCTGCAGTACTGC
GCCCAAGGCAAGTCGCCGTTCACAATCATATACGTGTCTAACAAGTGA
Protein sequence:
MEAASAGHVDIVRLLVAHGADVNAVSGSGNTPLMYACAGGHEDCVRALLDNGANVEDHNE
NGHTPLMEAASAGHVGVAKILLEHGAGINTHSNEFKESALTLACYKGHLDMVRFLLAAGA
DREHKTDEMHTALMEASMDGHVEVARLLLDSGAQVNMPTDSFESPLTLAACGGHVELAML
LLERGANIEEVNDEGYTPLMEAAREGHEEMVALLLGQGASINAQTDETQETALTLACCGG
FLEVADFLIKAGADAELGASTPLMEASQEGHLELVRYLLQAGAEVHAQTQTGDTALTYAC
ENGHTDVADVLLRAGALLEHESEGGRTPLMKACRAGHLCTVQFLVGKGADVNRMTANGDH
TPLSLACAGGHADVVKFLLACDADPFRKLKDNSSTLIEAAKGGHTTVVQLLLDYPHSLML
PRGNTGTEESGGLSSAQAAALGLSHAPAPGAPSQRALLPAHAPPSHPHAHAHPHAHPPPH
AHPSHAAHPAHPAHPALPAAAPQQDVPPNFAKVYLDGRKKQASGNGTVQPGVPAHPPAGA
AGAGGAGKHKCGRKQRPAAPHSDHHLPPPPDILEDHMCNHDVVHKHKLSLPPGFTWKDVN
KKFKNKNKVEKTCNRAEALAGQPRNESLPPTERTMLELADASGPPTLASSALHALDLQYC
AQGKSPFTIIYVSNK