| New model in OGS2.0 | DPOGS210715 |
|---|---|
| Genomic Position | scaffold2067:+ 571-5557 |
| See gene structure | |
| CDS Length | 2028 |
| Paired RNAseq reads | 5082 |
| Single RNAseq reads | 12636 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006327 (5e-23) |
| Best Drosophila hit | multiple ankyrin repeats single KH domain, isoform B (0.0) |
| Best Human hit | ankyrin repeat domain-containing protein 17 isoform a (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to ankyrin repeat domain protein 17 isoform a [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ankyrin repeat domain protein 17 isoform a [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0003723 RNA binding GO:0044419 interspecies interaction between organisms GO:0005737 cytoplasm |
| InterPro families | IPR002110 Ankyrin repeat IPR020683 Ankyrin repeat-containing domain |
| Orthology group | MCL10438 |
Nucleotide sequence:
ATGGAGGCCGCGAGTGCCGGTCACGTGGACATCGTGAGGCTGCTGGTCGCTCACGGCGCC
GACGTCAACGCTGTCTCGGGCTCCGGGAACACGCCCCTCATGTACGCCTGCGCCGGCGGA
CACGAGGACTGCGTGCGGGCGCTGCTCGATAACGGGGCCAATGTAGAAGATCACAACGAA
AACGGTCACACGCCGCTCATGGAGGCCGCATCAGCCGGTCACGTGGGCGTCGCGAAGATC
TTGCTGGAGCACGGCGCCGGCATCAACACGCACTCCAACGAGTTCAAGGAGTCCGCCCTC
ACGCTCGCATGCTACAAGGGTCACCTGGACATGGTCAGGTTCCTGTTGGCGGCCGGCGCC
GACCGCGAGCACAAGACTGACGAGATGCACACCGCCCTCATGGAGGCCAGCATGGACGGA
CACGTCGAGGTCGCCCGGCTGCTGTTGGACTCTGGAGCACAGGTTAACATGCCGACGGAC
AGTTTCGAGTCTCCGCTGACCCTGGCGGCGTGCGGGGGACACGTGGAGCTGGCTATGTTG
CTGTTGGAGAGAGGCGCCAACATAGAAGAAGTCAACGACGAGGGATACACGCCGCTCATG
GAGGCAGCTAGGGAAGGTCACGAGGAGATGGTGGCGCTGCTGCTCGGTCAGGGCGCGTCC
ATCAACGCTCAGACCGACGAGACGCAGGAGACGGCCCTCACCCTGGCCTGCTGCGGCGGC
TTCCTCGAGGTGGCGGACTTCCTCATCAAGGCGGGGGCGGATGCGGAACTGGGAGCTTCC
ACGCCGCTCATGGAGGCCTCGCAGGAAGGACACCTGGAGCTCGTACGATACCTGCTGCAA
GCCGGCGCGGAGGTCCACGCTCAGACGCAGACGGGCGACACGGCGTTGACGTACGCGTGC
GAGAACGGACACACGGACGTGGCGGACGTGCTGCTGCGGGCCGGGGCGCTGCTGGAGCAC
GAGAGCGAGGGAGGCAGGACGCCGCTCATGAAGGCCTGTCGCGCCGGACATCTCTGTACC
GTGCAGTTCCTCGTGGGCAAGGGTGCTGACGTGAACCGCATGACGGCCAACGGGGATCAC
ACGCCGCTGTCGCTGGCGTGCGCCGGCGGACATGCGGACGTGGTGAAGTTCCTGCTGGCG
TGCGACGCCGACCCCTTCCGCAAGCTCAAGGACAACTCTAGCACACTCATCGAGGCGGCC
AAGGGCGGACACACCACCGTCGTGCAGCTGCTGCTAGACTACCCCCACTCCCTCATGTTG
CCCAGAGGTAACACGGGTACGGAGGAGAGCGGGGGTCTGAGTTCCGCACAGGCGGCGGCG
CTCGGCCTGAGTCACGCCCCGGCGCCGGGCGCGCCCAGCCAGCGAGCGCTGCTCCCCGCG
CACGCACCCCCCTCGCACCCTCACGCACATGCCCACCCTCACGCGCACCCCCCGCCGCAC
GCGCATCCCTCGCACGCCGCTCACCCCGCGCATCCTGCTCACCCCGCCCTCCCCGCGGCC
GCGCCGCAGCAGGACGTGCCTCCCAACTTCGCCAAAGTCTATTTGGACGGAAGAAAGAAA
CAGGCGAGCGGCAACGGCACGGTCCAGCCGGGCGTCCCCGCGCACCCCCCGGCCGGGGCG
GCGGGCGCGGGAGGGGCCGGCAAGCACAAGTGCGGCCGCAAGCAGCGTCCCGCCGCGCCG
CACTCCGACCACCACCTGCCGCCGCCGCCCGACATACTGGAGGACCATATGTGCAACCAC
GACGTGGTGCACAAGCATAAGCTATCCCTCCCGCCCGGCTTTACTTGGAAGGATGTTAAC
AAGAAATTTAAAAATAAAAACAAAGTCGAAAAAACATGCAATAGGGCGGAGGCGCTCGCC
GGTCAGCCGAGGAATGAATCACTGCCACCGACTGAGAGGACGATGCTGGAACTAGCCGAC
GCCTCCGGTCCACCGACTCTCGCCTCGTCAGCTCTGCACGCCCTCGACCTGCAGTACTGC
GCCCAAGGCAAGTCGCCGTTCACAATCATATACGTGTCTAACAAGTGA
Protein sequence:
MEAASAGHVDIVRLLVAHGADVNAVSGSGNTPLMYACAGGHEDCVRALLDNGANVEDHNE
NGHTPLMEAASAGHVGVAKILLEHGAGINTHSNEFKESALTLACYKGHLDMVRFLLAAGA
DREHKTDEMHTALMEASMDGHVEVARLLLDSGAQVNMPTDSFESPLTLAACGGHVELAML
LLERGANIEEVNDEGYTPLMEAAREGHEEMVALLLGQGASINAQTDETQETALTLACCGG
FLEVADFLIKAGADAELGASTPLMEASQEGHLELVRYLLQAGAEVHAQTQTGDTALTYAC
ENGHTDVADVLLRAGALLEHESEGGRTPLMKACRAGHLCTVQFLVGKGADVNRMTANGDH
TPLSLACAGGHADVVKFLLACDADPFRKLKDNSSTLIEAAKGGHTTVVQLLLDYPHSLML
PRGNTGTEESGGLSSAQAAALGLSHAPAPGAPSQRALLPAHAPPSHPHAHAHPHAHPPPH
AHPSHAAHPAHPAHPALPAAAPQQDVPPNFAKVYLDGRKKQASGNGTVQPGVPAHPPAGA
AGAGGAGKHKCGRKQRPAAPHSDHHLPPPPDILEDHMCNHDVVHKHKLSLPPGFTWKDVN
KKFKNKNKVEKTCNRAEALAGQPRNESLPPTERTMLELADASGPPTLASSALHALDLQYC
AQGKSPFTIIYVSNK