| New model in OGS2.0 | DPOGS210910 |
|---|---|
| Genomic Position | scaffold1898:- 949-21059 |
| See gene structure | |
| CDS Length | 927 |
| Paired RNAseq reads | 336 |
| Single RNAseq reads | 904 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003091 (1e-86) |
| Best Drosophila hit | spire, isoform A (3e-49) |
| Best Human hit | protein spire homolog 1 isoform c (7e-37) |
| Best NR hit (blastp) | PREDICTED: similar to spire CG10076-PB [Tribolium castaneum] (1e-59) |
| Best NR hit (blastx) | PREDICTED: similar to spire CG10076-PB [Tribolium castaneum] (2e-55) |
| GeneOntology terms | GO:0007316 pole plasm RNA localization GO:0007315 pole plasm assembly GO:0007304 chorion-containing eggshell formation GO:0048477 oogenesis GO:0030036 actin cytoskeleton organization GO:0003779 actin binding GO:0045451 pole plasm oskar mRNA localization GO:0008270 zinc ion binding GO:0016192 vesicle-mediated transport GO:0030717 karyosome formation GO:0045010 actin nucleation GO:0005737 cytoplasm GO:0008017 microtubule binding GO:0030029 actin filament-based process GO:0005938 cell cortex GO:0005515 protein binding |
| InterPro families | IPR003124 Actin-binding WH2 |
| Orthology group | MCL10342 |
Nucleotide sequence:
ATGAGTGTGTTATTCCTGCAGCGTTGTATATGGCACTGCGGCGGTGGAAGTGGTCGTTTG
GCTCGTGAGACGGCCGCTGGTCACTACCGCGCCGTCTGCCGGGCGCTGGTCGCCGAAGCC
CTCGAGCTGGCCTCGTTCCTGGCCCGTGTTCGTGTCACAGGAGCCAGGGACCTCGGAGCC
GCTGAGGACTCCGCCACTCATCTCGACACTCTGCAGTTCTCAGATTGGGCGCGGTTCTGG
ATGCAAGTTATCGGAGAGTTGCGAATGGGAGTGAAACTGAAGAAGGTTAACTACTCACGG
ACGCCAATAGAATATGAATTGACTCCATATGAAATCCTCATGGACGATATAAGGTCGAGG
CGGTATACGTTAAGGAAAGTTGATGGCGCCATACCTCAGAATGTTAAGAAGGACGCACAC
GCAATGATACTCGAATTTATTAGAAGTAGACCGCCGCTCAAGAAGGCATCAGAACGCAAG
TTGGCCCCGGTCCGTCGCGAGGTGACTCCAAGGGAACAGCTGCTAGCTTCCATACAACTC
GGGAAACAGTTGCGACCTACGACGCAATCCAGGAGTATATCTACTAGTGGTTCAGGCAGC
GGTGCCGGTGGTGGCGAGTCTCGTAGAGGAGATGTGACGCCACACGCACCGCCACAGAGA
CGACTCATTAAAGTTGATTTTGACAATCTCGAGGATGACGAAGACGAAGACGACACAGAG
ACTTGTGTCAGTCCTGAAACCTGCCCGCCCCAGCCCTTCCCGAGGCACACCATCAAACAG
ACACCGCCGAAACCATGGAAGAGAACCGTGTCCGTGGATACGCCGCGGGCTCCTCCCCGC
GCGCGCATCTCACACGACGAGTACCATCAGTTTTTCGACGAGACCCTCGAATGTATGGCC
GCATGTCATGACCCGCTTTTCAGCTAG
Protein sequence:
MSVLFLQRCIWHCGGGSGRLARETAAGHYRAVCRALVAEALELASFLARVRVTGARDLGA
AEDSATHLDTLQFSDWARFWMQVIGELRMGVKLKKVNYSRTPIEYELTPYEILMDDIRSR
RYTLRKVDGAIPQNVKKDAHAMILEFIRSRPPLKKASERKLAPVRREVTPREQLLASIQL
GKQLRPTTQSRSISTSGSGSGAGGGESRRGDVTPHAPPQRRLIKVDFDNLEDDEDEDDTE
TCVSPETCPPQPFPRHTIKQTPPKPWKRTVSVDTPRAPPRARISHDEYHQFFDETLECMA
ACHDPLFS