DPGLEAN21067 in OGS1.0

New model in OGS2.0DPOGS200620 
Genomic Positionscaffold173:- 89459-95966
See gene structure
CDS Length1224
Paired RNAseq reads  15
Single RNAseq reads  50
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA008906 (2e-178)
Best Drosophila hit  runt (4e-77)
Best Human hitrunt-related transcription factor 3 isoform 1 (5e-47)
Best NR hit (blastp)  runt [Bombyx mori] (0.0)
Best NR hit (blastx)  runt [Bombyx mori] (0.0)
GeneOntology terms





















  
GO:0007540 sex determination, establishment of X:A ratio
GO:0016563 transcription activator activity
GO:0043193 positive regulation of gene-specific transcription
GO:0003704 specific RNA polymerase II transcription factor activity
GO:0005634 nucleus
GO:0010552 positive regulation of gene-specific transcription from RNA polymerase II promoter
GO:0043565 sequence-specific DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0030528 transcription regulator activity
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0003702 RNA polymerase II transcription factor activity
GO:0005515 protein binding
GO:0003677 DNA binding
GO:0007530 sex determination
GO:0007417 central nervous system development
GO:0007366 periodic partitioning by pair rule gene
GO:0007411 axon guidance
GO:0007400 neuroblast fate determination
GO:0007419 ventral cord development
GO:0005524 ATP binding
GO:0007377 germ-band extension
GO:0048592 eye morphogenesis
GO:0048813 dendrite morphogenesis
InterPro families


  
IPR000040 Acute myeloid leukemia 1 protein (AML 1)/Runt
IPR013524 Acute myeloid leukemia 1 (AML 1)/Runt
IPR008967 p53-like transcription factor, DNA-binding
IPR012346 p53/RUNT-type transcription factor, DNA-binding domain
Orthology groupMCL17547

Nucleotide sequence:

ATGCACCTTCCGCACGCAAGCCCTCCGACACCAACGATGGCGGATGTTTACTCCCACATC
CACGAGTACTACCGCCAGACCCACGGTGACTTAGTGCAGACTGGTTCACCAGCTGTATTA
TGCTCAGCTCTGCCCGGCCACTGGAGGTCGAACAAGTCTCTGCCTGTGGCTTTCAAGGTT
GTTGCCTTAGACGACGTCCAGGATGGCACTATAGTTACGATAAAGGCTGGAAATGATGAA
AACGTTATGGCTGAAATGAGAAACTGCACGGCGGTTATGAAAAACCAAGTGGCAAAATTC
AATGATTTGAGGTTTGTGGGACGAAGTGGACGAGGCAAGTCCTTCAGTCTCACCATCACC
ATCAGTACTTTTCCCTCACAAGTGGCAACTTACTCAAAGGCCATCAAAGTCACCGTTGAC
GGGCCGAGAGAACCCAGAACCAAACAGAATTATGGATATGGACACCCGGGAGCATTTAAC
CCGTTCCTGCTGAATCCTGGCTGGTTGGACGCAGCATATTTAAATTACGCTTGGGCTGAT
TACTTCAGACCGCCACAGCTAAGAGATCAAGCTCTTATTAAAGGTGGAGCGGCGCCAATT
ACTACTCCTCCAGTTGCGTTACCAGGAGCCGAACTGTTTCCGTTTCCTCCAATGATGGGA
ACTTTACCTCCAGGTGGACTGATACCACCGCCAGGGGCATTTTTACCACCGAACGGGATG
CTGCCATTTTCTCCTCATCCGGCGGACCTTGCACTGAAAAATTTACCGCAAGATATAAAA
AATGGCGTCAGTCCTTATGACGCTCTAAGGCATTTCCAAAGCAACGTCCTATCGATAGAC
ACTTCAAGCGCTCGATTGTCTCCAACAAGCAGTAGACAGAGCGGCAGCCCACGAAGCGTT
ATAAATACCAGTCCAAGGTCGAAAGCTGATTCTAAATCCGAAATTAATTCAACACACGAA
GCAACAATATCCGACGAATCGGATGAGGAACAGATAGAAGTCGTGAAATCAGCTTTCCAT
CCCACGCGACCAGCGAACGTTGAGCTCCAGGAGATGAAGCAAGTGCAAGCTGCAGATTCA
ACCGTATCGGATCGACCTCGTGTACGTAATGAACTCAAAGCACCTTTACATCGTACTACG
CGAGTTCTATCGACTAGTCCGACGTCGACGAAAATTTCCAACGGTGCTATATCAACGCAT
AAATCAGTATGGCGACCGTATTAA

Protein sequence:

MHLPHASPPTPTMADVYSHIHEYYRQTHGDLVQTGSPAVLCSALPGHWRSNKSLPVAFKV
VALDDVQDGTIVTIKAGNDENVMAEMRNCTAVMKNQVAKFNDLRFVGRSGRGKSFSLTIT
ISTFPSQVATYSKAIKVTVDGPREPRTKQNYGYGHPGAFNPFLLNPGWLDAAYLNYAWAD
YFRPPQLRDQALIKGGAAPITTPPVALPGAELFPFPPMMGTLPPGGLIPPPGAFLPPNGM
LPFSPHPADLALKNLPQDIKNGVSPYDALRHFQSNVLSIDTSSARLSPTSSRQSGSPRSV
INTSPRSKADSKSEINSTHEATISDESDEEQIEVVKSAFHPTRPANVELQEMKQVQAADS
TVSDRPRVRNELKAPLHRTTRVLSTSPTSTKISNGAISTHKSVWRPY