New model in OGS2.0 | DPOGS200621  |
---|---|
Genomic Position | scaffold173:- 22746-50391 |
See gene structure | |
CDS Length | 1383 |
Paired RNAseq reads   | 181 |
Single RNAseq reads   | 677 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008908 (4e-50) |
Best Drosophila hit   | lozenge, isoform A (2e-52) |
Best Human hit | runt-related transcription factor 1 isoform AML1b (1e-49) |
Best NR hit (blastp)   | RUNX4 [Aedes aegypti] (6e-66) |
Best NR hit (blastx)   | RUNX4 [Aedes aegypti] (4e-62) |
GeneOntology terms    | GO:0048477 oogenesis GO:0005634 nucleus GO:0003702 RNA polymerase II transcription factor activity GO:0035165 embryonic crystal cell differentiation GO:0042688 crystal cell differentiation GO:0035162 embryonic hemopoiesis GO:0030154 cell differentiation GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0048749 compound eye development GO:0045165 cell fate commitment GO:0003705 RNA polymerase II transcription factor activity, enhancer binding GO:0030097 hemopoiesis GO:0007165 signal transduction GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0007469 antennal development GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006952 defense response GO:0001709 cell fate determination GO:0035211 spermathecum morphogenesis GO:0035170 lymph gland crystal cell differentiation GO:0035168 larval lymph gland hemocyte differentiation GO:0005524 ATP binding GO:0035314 scab formation GO:0042060 wound healing GO:0016360 sensory organ precursor cell fate determination GO:0035163 embryonic hemocyte differentiation GO:0042675 compound eye cone cell differentiation GO:0048592 eye morphogenesis GO:0046672 positive regulation of compound eye retinal cell programmed cell death GO:0042981 regulation of apoptosis GO:0003677 DNA binding GO:0043565 sequence-specific DNA binding GO:0045467 R7 cell development |
InterPro families    | IPR000040 Acute myeloid leukemia 1 protein (AML 1)/Runt IPR013524 Acute myeloid leukemia 1 (AML 1)/Runt IPR008967 p53-like transcription factor, DNA-binding IPR012346 p53/RUNT-type transcription factor, DNA-binding domain |
Orthology group | MCL24962 |
Nucleotide sequence:
ATGCACTTGCCGTACGAGTCTCGAGGCCGTCGGCGGCGCGAGATGGCCGAACTCGAACCC
TGGTGGCTGCAGTCCATCATCGACGAGACCTTAGGAGAGCATCCCGACCTAGTGCGAACG
GGCAGTCCTGATTACATGTGCTCAATGCTGCCACAACACTGGCGCTCGAACAAAACTCTA
CCTGGTGGCTTCAAGGTGGTAGCATTGGGGGACGTGGTAGATGGCACACAAGTCACCGTA
CGAGCAGGCAATGATGAGAACTGTTCTGCCGAACTGAGGAATAATACGGCTGTTATGAAG
AATAGGATCGCTAAGTTTAACGATCTCAGATTCGTCGGTAGAAGTGGACGGGGTAAGAGC
TTTTCATTGACAATAACGGTCTCGACGTCACCACCACAGGTAGCGACCTACCTGAAGGCT
ATCAAAGTCACTGTGGACGGACCAAGGGAACCACGATCCAAAACTAGTAAGAGCTTTTCA
TTGACAATAACGGTCTCGACGTCACCACCACAGGTAGCGACCTACCTGAAGGCTATCAAA
GTCACTGTGGACGGACCAAGGGAACCACGATCCAAAACTAGTACAAACACTTCGCCTCAT
CCGATACGATCGTTGTCCTTCCAGCGTTCTTTCATTCCAAGCTCGAGCATGGCTATGAGA
GACATGGAATTCAAGTCCTCAACCAGAAGTCTGCGGTCATTGTCACACGAAGAAAGAGAA
TATAAGACTAACGCCAATCTACCGACAGAAGAAAATACTGGCAGTATCCTAGGAGCTAGC
GAGTGGAACACCGGATATCCGTCAACTGCCACCGTATATCCTAGCTACCCTCCTCTCCAG
CCGCCATATTACAAACCCGACCCTACCTTACATATACCCGGCGTTCTCCCCGAAATCCCT
ATCGGGACTCCCGACTACGGTTGTTATCAGACCAGTTCTAGCGGCTACGATAAAGGAAGT
CCGAGTGGAACGAACAGCAGTCTCACAGATCTCAATTCGCCATCGATGTCCACCCAAAGA
TACGAACCAAATTACTACAATTCATGGCCTAGCAACAGCTACAACTACCAATACAACAAC
ATAAACAATAATCCCGCCTGTCTCCAATCACACACGCCATATATAAACCCAAACCCCCAA
ATGATCCTTCCAAATCTTTATTCCACGGTAAACCAGAACCAAATACACGTCCACCTTCAC
AGCTCATCCGACAAATACAATCTAGAACAATACAAAATAAGCGACATAAATGGCGGGATT
TCAATAACCACCGAATTACAAGGTGCGGGGGAAGCGAGCGGTCTAGTGCAAACATGTGAA
ATAACTGATGACGTGAAACACGGGCTGTACGGAGCGAGCCAAGAAGTTTGGCGGCCATAT
TGA
Protein sequence:
MHLPYESRGRRRREMAELEPWWLQSIIDETLGEHPDLVRTGSPDYMCSMLPQHWRSNKTL
PGGFKVVALGDVVDGTQVTVRAGNDENCSAELRNNTAVMKNRIAKFNDLRFVGRSGRGKS
FSLTITVSTSPPQVATYLKAIKVTVDGPREPRSKTSKSFSLTITVSTSPPQVATYLKAIK
VTVDGPREPRSKTSTNTSPHPIRSLSFQRSFIPSSSMAMRDMEFKSSTRSLRSLSHEERE
YKTNANLPTEENTGSILGASEWNTGYPSTATVYPSYPPLQPPYYKPDPTLHIPGVLPEIP
IGTPDYGCYQTSSSGYDKGSPSGTNSSLTDLNSPSMSTQRYEPNYYNSWPSNSYNYQYNN
INNNPACLQSHTPYINPNPQMILPNLYSTVNQNQIHVHLHSSSDKYNLEQYKISDINGGI
SITTELQGAGEASGLVQTCEITDDVKHGLYGASQEVWRPY