New model in OGS2.0 | DPOGS200622  |
---|---|
Genomic Position | scaffold173:- 16272-20442 |
See gene structure | |
CDS Length | 897 |
Paired RNAseq reads   | 1338 |
Single RNAseq reads   | 3188 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008909 (2e-125) |
Best Drosophila hit   | female lethal d, isoform A (2e-58) |
Best Human hit | pre-mRNA-splicing regulator WTAP isoform 1 (6e-45) |
Best NR hit (blastp)   | PREDICTED: similar to FL(2)D protein, putative [Nasonia vitripennis] (3e-84) |
Best NR hit (blastx)   | PREDICTED: similar to FL(2)D protein, putative [Nasonia vitripennis] (4e-72) |
GeneOntology terms    | GO:0019099 female germ-line sex determination GO:0000375 RNA splicing, via transesterification reactions GO:0005634 nucleus GO:0007539 primary sex determination, soma GO:0007530 sex determination GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome |
InterPro families   | ND |
Orthology group | MCL15816 |
Nucleotide sequence:
ATGTCCGAAGAGTCGGAGCGTCACGGTGAGTCGGCGAGTGAAGGCGTCTCTAGCGGCGTC
ACAAACGTGGCGCGCGTGTTGTTGACCTCGCACCAGATCGACACCGCCACAGCGGAGTCA
CTTCGCGCCTCGTGGAGAAACCAGGACTTGTACATTGACCATCTCGAAACGTTGAACAAA
CAGCTGGAAGGAAGCTTGGAAAAGGCGAAAGAGGTAGAGGAAAGGATCAAACAACAGTAC
GCTGAGTCACAGCACAGAGAGAAAATACTTGTTAGGAGGCTAGCGGCCAAAGAACAGGAG
ATACAAGATTATGTAAGTCAAATAACCGAATTAAAATCATCACACGCGAGTCTTAACGGA
CGGCCGTCTCTACTAGATCCGGCTGTTAATATGGTAATATTGAGGTTGAAACAGGAATTA
ACATCGACAAAGGCGAGGCTAGAGGAAACACAGAACGAACTGTCAGCATGGAAGTTCACG
CCTGACTCGAATACGGGAAAGAAATTAATGGCCAAGTGTAGATTGCTACATCAAGAGAAC
GAAGACTTAGGACGGATGACATCTAGCGGCAGGATAGCGAAGCTAGAGGGAGATCTGGCG
TTACAGAAGAGTTTCAGCGAGGAGGTCAAGAAATCACAATCAGAGTTAGATGAGTTCCTT
CAGGAATTGGATGAAGACGTGGAAGGTATGCAGAGTACCGTGTTATTCCTGCAACAGGAA
CTCCGAGCGACGCATTCCACAGTCAATGGGAACAGACCCTCACCAGAGAAACGGATCTAT
TCTGGTAGCGAGTGCAGCGACACGCCTATCAGCAAGCGGAGACGGGCGTCAGTACTCTCT
CTCGACTACAACGAGGAGGAAGAACCACTAACTGTGACGAACGGACAAACAGACTAG
Protein sequence:
MSEESERHGESASEGVSSGVTNVARVLLTSHQIDTATAESLRASWRNQDLYIDHLETLNK
QLEGSLEKAKEVEERIKQQYAESQHREKILVRRLAAKEQEIQDYVSQITELKSSHASLNG
RPSLLDPAVNMVILRLKQELTSTKARLEETQNELSAWKFTPDSNTGKKLMAKCRLLHQEN
EDLGRMTSSGRIAKLEGDLALQKSFSEEVKKSQSELDEFLQELDEDVEGMQSTVLFLQQE
LRATHSTVNGNRPSPEKRIYSGSECSDTPISKRRRASVLSLDYNEEEEPLTVTNGQTD