| New model in OGS2.0 | DPOGS200612 |
|---|---|
| Genomic Position | scaffold173:+ 123317-142478 |
| See gene structure | |
| CDS Length | 1377 |
| Paired RNAseq reads | 15 |
| Single RNAseq reads | 43 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008971 (3e-128) |
| Best Drosophila hit | RunxA (4e-104) |
| Best Human hit | runt-related transcription factor 1 isoform AML1b (1e-53) |
| Best NR hit (blastp) | PREDICTED: similar to CG34145 CG34145-PA [Tribolium castaneum] (1e-161) |
| Best NR hit (blastx) | PREDICTED: similar to CG34145 CG34145-PA [Tribolium castaneum] (2e-150) |
| GeneOntology terms | GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0005524 ATP binding |
| InterPro families | IPR000040 Acute myeloid leukemia 1 protein (AML 1)/Runt IPR013524 Acute myeloid leukemia 1 (AML 1)/Runt IPR008967 p53-like transcription factor, DNA-binding IPR012346 p53/RUNT-type transcription factor, DNA-binding domain |
| Orthology group | MCL15325 |
Nucleotide sequence:
ATGCACTTGACGAGTGCCTCCAGCGGGGCCGTGTCGCCGGACACCAGCTCCGCACTCCTC
CACGAGACATACACCAAGATGACATCAGATATACTCGCGGAGAGGACGCTGGGTGATTTT
CTATCGGAGCACCCGGGGGAATTGGTGAGGACTGGTAGTCCACACTTCGTATGCACAGTG
CTACCTCCTCACTGGCGATCCAATAAAACGCTGCCGGTGGCGTTTAAGGTGGTAGCGCTC
GGTGACGTTGGAGACGGAACACTGGTGACTGTCAGGGCTGGTAACGATGAGAACTGCTGC
GCTGAACTCCGTAACAGCTCGGCGGTCATGAAGAACCAAGTGGCAAAGTTCAACGATTTG
AGATTCGTCGGCCGTAGTGGTCGCGGGAAATCATTCACATTGACAATAACGATATCGACG
ACGCCTCCGCAAGTCACAACCTACAATAAGGCTATCAAGGTCACCGTGGACGGACCCAGG
GAACCGCGGTCGAAAACCAGGCAGCAGCAGCAATTTCATTTCGCATTCGGTCAACGGCCG
TTTCCTTTCCCACCAGATCCTCTGGGAGGATTCCGGATGCCGCCGATTACTACATGTCAG
AATATGAGTCAATTTGGTTTGAGTTCGAGTAACTCTCATTGGGGCTATGGTGGTGCCGGC
GCTTACCCAGCATACCTTCCATCCTGTGCGGCTCCAGCGACACAGTTCAATACACCGACA
TTAGGCTTCGCTGGTTCCGTCCCTGAACAAACCCCCACTCAGGATTTCACTAATAACACC
GTTCTACCGGATACGACGGGAGTGGATCTGGACCAACAGCTGTCCGGTCTAGTGGGATCG
TCTCCATCACACCACGGCAGCTTGCTACCTAGATACAACAACAACACAGACTACACGCTA
TCCACCGGCCCACGCTCCCTCAGCGACAATAGCTCGCAACCGGAATCCCCGGTCCAAGAC
GACCTTTTAACTTCAAACACAACAACCAACATCGGTCACAACCATTCGAACTCCAACTTC
TCGCTAATGAGTACTCAGAATGCATCATACGGAAGCAGCAACTGCAACAATTCCCTCTAC
CCCGTTCTACCGGCCAGCCTGCTATACAGTCAATTATACACAGCAGCTAATCAAAGTCAC
AATTTCCATCCGCTCCATTCGAACTCCATCCATTCAACGCAGAATCATCACAACGAACTA
CAAACTATGATGGACCAGATATCATCAACCACGAACCATAGACAGGGTCACGGGCAAGAC
TTGTTGGGTGGGAACTCGTGTGCTGCTGCGGCCGCGAGGGGGGAAGATGGAAGGGTTAGT
TTGGGACAGCGGGGAAATCCCCAACCAGACAGCAACACCGTTTGGCGGCCCTATTGA
Protein sequence:
MHLTSASSGAVSPDTSSALLHETYTKMTSDILAERTLGDFLSEHPGELVRTGSPHFVCTV
LPPHWRSNKTLPVAFKVVALGDVGDGTLVTVRAGNDENCCAELRNSSAVMKNQVAKFNDL
RFVGRSGRGKSFTLTITISTTPPQVTTYNKAIKVTVDGPREPRSKTRQQQQFHFAFGQRP
FPFPPDPLGGFRMPPITTCQNMSQFGLSSSNSHWGYGGAGAYPAYLPSCAAPATQFNTPT
LGFAGSVPEQTPTQDFTNNTVLPDTTGVDLDQQLSGLVGSSPSHHGSLLPRYNNNTDYTL
STGPRSLSDNSSQPESPVQDDLLTSNTTTNIGHNHSNSNFSLMSTQNASYGSSNCNNSLY
PVLPASLLYSQLYTAANQSHNFHPLHSNSIHSTQNHHNELQTMMDQISSTTNHRQGHGQD
LLGGNSCAAAAARGEDGRVSLGQRGNPQPDSNTVWRPY