| New model in OGS2.0 | DPOGS215362 |
|---|---|
| Genomic Position | scaffold2176:+ 27407-31747 |
| See gene structure | |
| CDS Length | 1254 |
| Paired RNAseq reads | 444 |
| Single RNAseq reads | 1937 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009565 (1e-27) |
| Best Drosophila hit | Sequence-specific single-stranded DNA-binding protein, isoform C (2e-55) |
| Best Human hit | single-stranded DNA-binding protein 3 isoform a (1e-51) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (9e-121) |
| Best NR hit (blastx) | conserved hypothetical protein [Culex quinquefasciatus] (6e-65) |
| GeneOntology terms | GO:0003697 single-stranded DNA binding GO:0005634 nucleus GO:0045449 regulation of transcription GO:0030528 transcription regulator activity |
| InterPro families | IPR008116 Sequence-specific single-strand DNA-binding protein IPR007591 Single-stranded DNA-binding protein, SSDP IPR006594 LisH dimerisation motif |
| Orthology group | MCL14924 |
Nucleotide sequence:
ATGTATGCCAAGGGCAAAAGCTCTGCGGTACCTTCGGACGCTCAGGCACGGGAGAAGTTG
GCCCTTTATGTGTATGAGTACTTACTGCACGTCGGGGCACAGAAAGCGGCGCAGACTTTC
CTTTCTGAAATACGATGGGAAAAGAACATAACACTCGGCGAGCCGCCCGGATTCCTGCAT
TCCTGGTGGTGTGTTTTCTGGGACCTGTACTGCGCCGCGCCTGAAAGGAGGGACACATGC
GAACACTCCTCTGAGGCTAAGGCATTCCATGACTATGGATTCGTCAATTCAGGTTATGGT
GTTAACGGCATCGGTCACAACGCAGGCCCGGCGCCGCCTAATGACGGTATGGGTGGCGGA
GGTATGCCACCAGGTTTCTTCCCCAACTCCTCACTCCGACCATCACCGCCAGCCCCACAT
CCTGGATCTCAGCCCTCACCGCATGGACCACAGCCACAGTTGATGGGGACAGGCCAGCCG
TTCATAGGACCCTGGTACTCGGGAGGACCAAGAACAGCCGTCAGAATGGGCATGGGAAAT
GATTTTAATGGTCCTCCGGGTCAAGGCATGATGTCGAACTCCTTGGAGCGAGGCAGCGGT
ATGCTGGGCGGGCCGCGCATGACCCCGCCCCGCCCCGGCATGGGACCCATGAGCCCTGGT
GCATATGCAGCCGGCATGCGTGGCCCACCGCCACAAGCCCCAGGTATGCCACCAATGGGT
ATGGGACCACGTGGCGCTTGGGCCGGCGGAAGTGGCGGCGCTGGTGGGGGATCCGCCCCC
CTCAACTACAGCGGAGGCTCGCCCGGCGCGTACGGGGCGCCTCCCGGGTCCAATGGACCC
CCAGGACCTCCGACTCCCATCATGCCAAGCCCACAGGACTCATCCAATTCGGGCGGTGAC
AACATGTACACATTGATGAAGCCGGTGGGCGCAGCCCTAGGGGCAGAGTTCCCGCTCGCC
GGCGAGCACGGGCCCTCGTCGCAGCACCTACCTCAGCCTCCCACTTCCGAAGGGCTAGGC
GGGGTGGACGGTATGAAGGCGTCCCCGGGCGGTGTCGGGGGCGGAGGCCCGGGGACTCCG
AGAGAGGACTCCGGCTCTGGAATGGGGGATTACAATTTAAGTTTCGGCGGACCGGGCGGC
GATCAGAACGACCAGACGGAGTCGGCGGCCATTCTCAAGATAAAGGAGAGCATGCAAGAG
GAGGCGAAGAGATTCGAGAAGGATCCGGACCATCCAGATTACTTTATGCAGTGA
Protein sequence:
MYAKGKSSAVPSDAQAREKLALYVYEYLLHVGAQKAAQTFLSEIRWEKNITLGEPPGFLH
SWWCVFWDLYCAAPERRDTCEHSSEAKAFHDYGFVNSGYGVNGIGHNAGPAPPNDGMGGG
GMPPGFFPNSSLRPSPPAPHPGSQPSPHGPQPQLMGTGQPFIGPWYSGGPRTAVRMGMGN
DFNGPPGQGMMSNSLERGSGMLGGPRMTPPRPGMGPMSPGAYAAGMRGPPPQAPGMPPMG
MGPRGAWAGGSGGAGGGSAPLNYSGGSPGAYGAPPGSNGPPGPPTPIMPSPQDSSNSGGD
NMYTLMKPVGAALGAEFPLAGEHGPSSQHLPQPPTSEGLGGVDGMKASPGGVGGGGPGTP
REDSGSGMGDYNLSFGGPGGDQNDQTESAAILKIKESMQEEAKRFEKDPDHPDYFMQ