| New model in OGS2.0 | DPOGS215363 |
|---|---|
| Genomic Position | scaffold2176:+ 37117-40406 |
| See gene structure | |
| CDS Length | 1158 |
| Paired RNAseq reads | 976 |
| Single RNAseq reads | 2179 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008641 (2e-79) |
| Best Drosophila hit | kin17 (2e-110) |
| Best Human hit | DNA/RNA-binding protein KIN17 (1e-101) |
| Best NR hit (blastp) | zinc finger protein RTS2, putative [Pediculus humanus corporis] (4e-141) |
| Best NR hit (blastx) | zinc finger protein RTS2, putative [Pediculus humanus corporis] (1e-135) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0006310 DNA recombination GO:0006281 DNA repair GO:0006260 DNA replication GO:0006974 response to DNA damage stimulus GO:0006950 response to stress GO:0005634 nucleus GO:0003723 RNA binding GO:0003677 DNA binding GO:0046872 metal ion binding GO:0006397 mRNA processing GO:0008270 zinc ion binding GO:0005622 intracellular GO:0003690 double-stranded DNA binding |
| InterPro families | IPR019447 DNA/RNA-binding protein Kin17, conserved domain |
| Orthology group | MCL13048 |
Nucleotide sequence:
ATGGGTAAAGCAGAAAAAGGGACGCCAAAATACATAGCGAACAAAATCAAAGCAAAAGGC
CTCCAAAAATTAAGATGGTACTGCCAGATGTGCCAGAAACAGTGCAGGGACGAGAACGGC
TTCAAATGCCACACAATGTCCGAGTCCCATCAGCGCCAGTTGCTGCTCTTCGCTGACAAT
GCCTCCAAATACATAGACGAATTTTCGAAGGAATTCTCTGATGGTTATGTGGAGCTACTT
CGTCGTCAGTTCGGTACCAAGCGTGTGAATGCCAATAAAGTTTACCAGGATTACATATCC
CATCGCGACCATCTCCACATGAACGCGACCCAATGGGAGACTCTCACCGACTTCGTCAAG
TGGCTAGGCCGGGAAGGCAAGTGTGTTGTCGACGAAACCGAAAAGGGTTGGTACGTGGCA
TATATAGATAGGGATCCGGCTACAATAGCTGCACAGGAAGCGAAGGCGAAGAAGGATAAG
TGTGATAAAGACGACCAGGAGAGAATGTTAGAATTTATCAGACGTCAAGTTGAAAAGGGA
AAGAAGGAAACGACGAGCGTTGAACCGAAATTCACCGAGCTGAAGAGGGAGGGCAGTCAG
GAAAAGTTGACCTTAAACTTGAATATGAAGCGGAAGGTCGAAGAAGTTAAACCAGAAATA
AAAGCTGCATTCAAAATGAAAGTGAAAGCTGAACCGGCGAAGAGAACAAAGACAGAGGAA
AAGTCTAAACAGACGGCTCTGGATGAGATCATGGCGATGCAAGAGAGAGAGAAAGAGAGA
CACAACCGCAAGGATCACTGGCTGGTTGAAGGCATCATTGTGAAGATAGTTACCAAGTCG
CTCGGTGACAAGTATTATAAGAGGAAAGGCACAATAACGAAGGTTGTGGACAAATATGGT
GCTCATGTCAAGTTAACCGATGAAGCGGTCACATTGAAATTGGACCAGAATCATCTTGAA
ACTGTGATACCTTCACCGGGAAGACATGTGAAGTTTGTGAACGGAGCGTACAGGGGACAG
ATTGGTGTTTTAAAAGACATCAACACTGACAAATATTGCTGTGACGTAGAAATATCAGAA
GGTCTATTAACAGGGAGAGTGGTGAAAGGCGTGCAGTACGAGGACATTAGTAAATTATCT
TCGGGACAAATAAACTGA
Protein sequence:
MGKAEKGTPKYIANKIKAKGLQKLRWYCQMCQKQCRDENGFKCHTMSESHQRQLLLFADN
ASKYIDEFSKEFSDGYVELLRRQFGTKRVNANKVYQDYISHRDHLHMNATQWETLTDFVK
WLGREGKCVVDETEKGWYVAYIDRDPATIAAQEAKAKKDKCDKDDQERMLEFIRRQVEKG
KKETTSVEPKFTELKREGSQEKLTLNLNMKRKVEEVKPEIKAAFKMKVKAEPAKRTKTEE
KSKQTALDEIMAMQEREKERHNRKDHWLVEGIIVKIVTKSLGDKYYKRKGTITKVVDKYG
AHVKLTDEAVTLKLDQNHLETVIPSPGRHVKFVNGAYRGQIGVLKDINTDKYCCDVEISE
GLLTGRVVKGVQYEDISKLSSGQIN