New model in OGS2.0 | DPOGS204570  |
---|---|
Genomic Position | scaffold2738:+ 7533-11063 |
See gene structure | |
CDS Length | 3000 |
Paired RNAseq reads   | 1447 |
Single RNAseq reads   | 3570 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001430 (0.0) |
Best Drosophila hit   | CG17665, isoform A (0.0) |
Best Human hit | integrator complex subunit 3 (3e-173) |
Best NR hit (blastp)   | PREDICTED: similar to CG17665-PA.3 isoform 1 [Apis mellifera] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG17665-PA.3 isoform 1 [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0006974 response to DNA damage stimulus GO:0005634 nucleus GO:0006281 DNA repair GO:0005575 cellular_component GO:0008150 biological_process GO:0003674 molecular_function |
InterPro families   | IPR019333 Integrator complex, subunit 3 |
Orthology group | MCL13140 |
Nucleotide sequence:
ATGGAACAGACTAAAGTTAATACGCCTAGGCTTTTTATGTGCACCGCTATAGAAAACAAG
GATGAAATAGAAGAGAGATACGAAAGAGCTTACAATTTTTTTCAATCTCTGGTTGCGGAC
TGCAGTGAAAAAGAAGCGCACGATGCACTTAATAACGCCGTTTGTAAAAATCACGAAGAC
GTATCATTGGGGATGCTCATGTCCATTCTTACTGAACCTCACAATGCCACCAAGTGTTAC
AGAGACCTTACACTAATCACGAGGGATGGGTTAAACTCCGTACTTAACAACCTGTCCACT
TTAATCCTAGAAAGGTATTTAAAATTCCAGGACATGACCCGTAATCAATTGTTGTGGCTT
GTGAAAGAAATGATAAGAAATGCAGTAACTGGTGTTGATAGTGTTTGTTGGAACTTAATG
CGTTATGCATCAGGTGGTGACATCACACCTAAAAATATTATATTAGTTGAATCTCTTTTA
GATATTTATATTGACAATCGAATGTGGCTAGATAAATTTCCAGTTCTTGTTTGTATGGTA
GTCTACACTTATTTGAGATTAATTGAAGATCATAACATACCACAGTTAATGGCACTAAGG
CAGAAAGAAGTAAATTTTGTTATAGCTCTTATAAGGGAGCATTTTAATGAGGTTCTGACT
CTCGGTAGAGATTTAGTGAGACTGTTACAGAATGTTGCTCGTATACCTGAATTTAACCAA
TTGTGGCAAGATATTTTAATGAATCCCAAGTCTTTATCACCAACATTTACGAATGTTATG
CAACTTCTGCAAATCAGAACATCGAGAAGGTACTTACAATCAAGATTAACACCAGACATG
GAGCGGAAATTAGTCTTTCTAACATCGCAAGTCAGATTTGGTCACCATAAAAAATATCAG
GAGTGGTTTCAACGGCAATATCTTGCTACTCCGGAATCTCAGTCACTAAGGAGTGATATG
ATTCGGTTTATTGTAGGAGTAATACACCCTACAAACGAACTACTTTGCTCTGATATTATT
CCAAGATGGGCGGTTATTGGATGGCTTTTAACAACTTGTACCTCAAATGTAGCCGCATCA
AATGCGAAGTTGGCTCTTTTCTATGATTGGCTATTTTATGACCCTGAAAAAGATAATATA
ATGAACATAGAGCCTGCCATACTAGTGATGCACCATTCAATGAGATCACATCCAGCGGTA
ACAGCCACATTACTAGATTTTCTTTGCCGTGTAATCCCAAATTTCTATCCCCCATTTGCT
GATAAAGTCAAACAAGGCATCTTCAACTCTTTGCAGCAAATAATTGAAAAAAGAGTATTA
CCAAATTTACAGCCATTATTTGATTCTCCAAAATTAGACAGAGAACTGCGCACAACAGTA
AGAGAAACATTTAAAGAGTTCTGTAGCAATGGAAATGGGGAGGGCGTATCAGGGATTCGT
GACGAAGGGAATGATGATATACCAAGAGGAGGTCCAGATGAGCCAGCTTTTTCTGACGAT
GAAGATGATATGCTTCCAACTATAGCTGAAGACACTGATGACGATGATTTGCCATTATCA
GAAGTTCGCGCCAGGGAACGGCCCGAGTTGGCCGCCGCTATGCCACTATTACTTCGACCT
TTTGCTGAAACATTACTAGACGAACGGTCGTCCACAGCCGCTACTGCGTTATTAAACGCC
TGCAGCAGCCCTATGCCAACAGCGACTGCGTTAGCTGATTTATTCGCTGCTACCTTGCAA
GAAGCACCACCTTTACACATCAATCGCAATCCTACACCAGCTGAATTAGACACTGTAATG
AACTCTCCAATATTTTCCATGTTCAACTATCTCGTTGGCAGCAATGATAGCAATGAAGCG
AAACGTAAACTAGTATTAGAAACATTCAAAGAAATATATGCACAGAGTTCGGTACATAGT
GTAGGTTACTGTTTACTATTTTATCTTAAAGTATGTTATGAAAGAGAGCGGCGTGCAGAG
AAAGATCCCGTTAAAAAGAGGAATGTTAAGTTTAAAGTGGAAGTATATAAAGAGTATTGT
AGTTTCTTAGAATTAAAACTTGCTGAGAGCTTAGCGGATGATTTTGAGAGGTGCCAAGAA
TGTGATGCGAATGTACTTGTATGGTTAATACCAGATGTATATAGAGAGTTTAAAGATCAA
GTCCAAAATCACATCAGACTACTGCACATAATTGTTTCTACATTAGATGCAGGACAATTG
CAGCGCCTCGTGTGTCTGACGTTACAAGGCAACTTGATGATGTTCAAATCTGATGATATA
ACAACCATGCTCTCAACAAGTCTCGGTTGGGAGACCTTTGAACAGTATTGTCTGTGGCAG
CTGCTGACTGCACATGAAATTTCAGTAGAAGACGTGTTGCCAATTATACCTAAACTTTCT
TATAAAGATCATGCCGAGGCACTGACATCAGTCCTGTTAATGCTAAAACAAGAACGGCCC
ACTGCAGATGTGGTCCGGCAAATGTTTTGTAGGACAGTTGATGATGAGGATACATTTGTA
GTTTCTACAGTAATGTACTGGTGTCAGGACTATGAGGATAAAGTTGCAGATTTGCTTGCT
GTGCTTCTAAGCACTAGGTATCCAGGGACTAGCCCAAATAAAAGAAAACGACCTGGCAAA
CATAACATTCCACCAAACGCGCCGCCTTCAGCAGAACTAGTTTTAGGTCACTTAGAGCAA
ATAAGAGTATGTTGTGTTGAACAAGATGATATGTCAATTTTTAATATGGAGTGTTTGCAG
AAAGCCTTACAACAATCACAGTCAAATAGTAGTGATAGTTTAAAGAGACAATATGGTGAT
TTATTTTCATTAGCTTGGGAAGATGAACTTCCAATATCAAGAAGAGCAAGGAAAATGGTT
TCAAATTCATTACCTATGAATCCTAACTTACATTCATCTAATGAAGATAGTGAGGAAGAA
GAAATTGTTAAACCCAAGCAAGCAAAACGAAGAAAGAAGGCAATTTCTGACAGCGATTGA
Protein sequence:
MEQTKVNTPRLFMCTAIENKDEIEERYERAYNFFQSLVADCSEKEAHDALNNAVCKNHED
VSLGMLMSILTEPHNATKCYRDLTLITRDGLNSVLNNLSTLILERYLKFQDMTRNQLLWL
VKEMIRNAVTGVDSVCWNLMRYASGGDITPKNIILVESLLDIYIDNRMWLDKFPVLVCMV
VYTYLRLIEDHNIPQLMALRQKEVNFVIALIREHFNEVLTLGRDLVRLLQNVARIPEFNQ
LWQDILMNPKSLSPTFTNVMQLLQIRTSRRYLQSRLTPDMERKLVFLTSQVRFGHHKKYQ
EWFQRQYLATPESQSLRSDMIRFIVGVIHPTNELLCSDIIPRWAVIGWLLTTCTSNVAAS
NAKLALFYDWLFYDPEKDNIMNIEPAILVMHHSMRSHPAVTATLLDFLCRVIPNFYPPFA
DKVKQGIFNSLQQIIEKRVLPNLQPLFDSPKLDRELRTTVRETFKEFCSNGNGEGVSGIR
DEGNDDIPRGGPDEPAFSDDEDDMLPTIAEDTDDDDLPLSEVRARERPELAAAMPLLLRP
FAETLLDERSSTAATALLNACSSPMPTATALADLFAATLQEAPPLHINRNPTPAELDTVM
NSPIFSMFNYLVGSNDSNEAKRKLVLETFKEIYAQSSVHSVGYCLLFYLKVCYERERRAE
KDPVKKRNVKFKVEVYKEYCSFLELKLAESLADDFERCQECDANVLVWLIPDVYREFKDQ
VQNHIRLLHIIVSTLDAGQLQRLVCLTLQGNLMMFKSDDITTMLSTSLGWETFEQYCLWQ
LLTAHEISVEDVLPIIPKLSYKDHAEALTSVLLMLKQERPTADVVRQMFCRTVDDEDTFV
VSTVMYWCQDYEDKVADLLAVLLSTRYPGTSPNKRKRPGKHNIPPNAPPSAELVLGHLEQ
IRVCCVEQDDMSIFNMECLQKALQQSQSNSSDSLKRQYGDLFSLAWEDELPISRRARKMV
SNSLPMNPNLHSSNEDSEEEEIVKPKQAKRRKKAISDSD