New model in OGS2.0 | DPOGS209025  |
---|---|
Genomic Position | scaffold379:- 50645-59002 |
See gene structure | |
CDS Length | 4056 |
Paired RNAseq reads   | 7295 |
Single RNAseq reads   | 19288 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010026 (4e-35) |
Best Drosophila hit   | CG31534, isoform A (2e-20) |
Best Human hit | LIM domain only protein 7 isoform 1 (2e-13) |
Best NR hit (blastp)   | PREDICTED: similar to CG31534 CG31534-PA [Tribolium castaneum] (4e-64) |
Best NR hit (blastx)   | PREDICTED: similar to CG31534-PA, isoform A [Apis mellifera] (2e-31) |
GeneOntology terms   | GO:0008270 zinc ion binding |
InterPro families   | IPR001781 Zinc finger, LIM-type |
Orthology group | MCL15657 |
Nucleotide sequence:
ATGCATTGCGCTGGGGTCGGCTCAGCCGTAGAAGGAAATCTCGCTCTAATAAAGACTAGG
AAATCGTTACCTCCATTTCTTTGTTTAGCCGACATAGCAGACTTACAGGCTCTTAAAGCC
GGACGGAGAAGGAGAAACCCTCTAGCTCTGTATACAGAGGACGATGGGCATGATTTAAGT
GACTTGGGCATCGGCACCTCTAGCACCAAGAGCAGTCTCAGTGAGGATTGTGACACACAT
AGTTTGGCCAGCGATGGCATGGACTTGGATAAAAACCATTCAGATGTGGAAACCATATCC
AATTGCGATAACAATCGTAAATTAGGTTCCAGTGCAAACGAATACGATACGTGTACCACC
ATGACCATTAGTTCTCCCGAACCCGAGGAATATACATACGAGGGCGCTATAGAGGGATAC
AAGTCAAGAATTATATCACAGACCAACAGTAACATAGTTAAGACGGTGGTCAACAATAAT
GTAAAGGAAAACACCCCCGAAAAGACAAACGGTGACATTAATCGAATTAGGACATCGGTC
AGCAACAAGATCGAAGAAAAAGTTTCATCGTTTCAACACGAACGGGCTAATGATCTTAAA
AATAATAATCAGAAGAAAGATTTACCTAAAGTCGATATACATAAACGAAGAGAACAATTC
GAAAGGGAACATTCACAAGAGTTGCAATTGTCAAAACCTAAAGTGCCCGAAATCGCCAAT
AAAAAGTCGATTAAGGAGAGATTGTCTTGTTTAGAAAAGTTCAATGAAGATATTCAACTT
CAGAAGTCAACTAATGACCTTGCTAAACTACCCGGGGAAGTGAAACCCCTGAAAGATAGA
CTTAATTCACTCGAAAAGGTTAAATCAGCTAATGCGGAAACAGAAAAAAATAAGAGATTG
TCTAATGGAGACCTCAGTAATTCAAAGTCGCTCAGAGAGCGTTTGACAAGCTTGAAGTCA
CAGAAATCAGAAGAGGAAGTTAAGGTCACAAAAACAGAAGTCAAAGAGGTTTCAATGAGC
ATCAAAGAGCGGTTGTCTTGCCTTGATGCTGCCAAGAATAAAGAAATACCAAAAATTGCA
ATCGAAGCGGAAATTATAAGCGACGATAAGATCCCAGAACAAACTGAACACAGTGAATTA
AAAGATAAACTGTCCAATAGTTCGCTGAAACTTAATTTGGCTGGAATAGAAAATCAGATG
CAAAGCTTCTGCCGCTCCCTCGATAGCTTAGACATAAATGATCAGTCGTCTCCTAATTCT
TTCGACAGAGTCCAAAGTTTAGAAGATTTTGACTGCGCTGAAATGCAAAACAACACAGTT
CCGAGTGACATTGAAACTGAAGACAGTGGGATCCATACAGCTAGAGACTCGTGTGCACCA
GCTGACGATATTGCAGATTTGACTCAAGTAGCTTCTCCAATTGGAGAACCTATGGCTGAA
GTATCTGAATACGAGTCGTCCAACGAGTACAACGATACCATAATGACTTTAGAACCCGCT
AAAACTGAGAAACCTATTGGGATGGATTCGGAGCCGTATCAGATGAACGATGAAGTTCAA
GGAAACGAGGAGGAAGATAGTGATAGTGGAAGCAATTATCTCCAAGCCGTTTCTCAACCG
GAAGAAAGCAGCGCCACGGAAATTACAGAGATACAAATAGATAAAGAAGATGAAGACACT
TTAAAGAGTCTGGACAATCAGGACTCCAGTGTAAGTCTTAATGAACCCGCGTCCACGGCT
TCCGAGGGCGACACGGTCGTGTTCCAGGGAAAGATGACCATTCACGTGAACTTGAATGAC
ATCCGCAGTTCTTCTGGGGCTGGATACTGTAACACTAACAATGTAGCTAACGAGTCGACT
AACAACAAGGGCATGGTAACTGTCTCTAATATTACAACCACCACTAACATCTCATCGAAG
TATTCCAGACCATTTCAAACTAACATTAAAGCATCTAGCGACACGCTTAACAGTGACGTT
TACATTGACGATTCATCGATGCACTCTCGTAATATTAACGAAGGTGTTCCGTACACCGAC
ACGTCCCATACCGATCATGGTTTTCATAATTGTGTACAGACCCCGGACTCCACCCACCCC
GAACCCCGTAATAAAGTGGTTATAGACGCTTTAGAACTAGCATTCCAGGAATTGGATTCT
GAGGAAAGCGTCGACGTCGCTATGGACGATACTATAAGCAACACAACAACAGCCAGTGAC
GCTAAGATCACTGATAACGTCGACGATTTGCTGAACTTCGACGTCAATAAGAAAGTATCA
GTGACCCCGTTGTACGAAAACATTGATATATTTAATCAGAACTTGGTCGAGTCCAGCGAC
TTCCCTCTGGATCTGCCCACCAACGCACTCGAACCTCCTAAAGAGAAGCCTCCGCCGCCG
CCCACGGAAGACGGCCCCGACGAACTTCTAGGAAATGGTAATTTCAAGCACACGAGCTCG
GCGCGCCGCATCAAGAAAGAGATTCGAAACAAGCGAACGAGTTTCCTCGGCATCGAGGGT
CAAGACGATAGCTATCTAGATGTCGATCTTAAACTATCACCTCGGCCCGACATCACTTCC
TTCCTACAAGAGGAGACGAAAATCGAGAAACTTCTATACAAAAAGACTTTATCCCACGAT
AACGCTAAGTTGAGGGACAGTCGGGACTCGGGCGTGGATGTGGACAGGGGATCGGAGACC
TGGTACAGAGGACACTCCTCACCAGACACCTCCAGCCCGCACAGTCGCCAGAACAGCGAG
CCTTACCAAATGACGGTGACATCTGACGAAGAAGAAGCAACGAAAAGTGCTGAACAAGCA
TTCTCCAAGAATTTAACGACTAAGCTGTCCGGCTTGACTGAAAATGGTGAAACTCAAGAT
AATAAAATAGATCACTTGGATAAGAAAATACAACAACAGCAGGAGGTGCTGCGCTTCGAA
CGAGAGCTGCTGCAGCTGGAACAGGAGGAGCTGAGGCGGCAGCGCGAGAACCTGCTCAGG
GACCAGAACCGAATCATACAGAAGTCTGTCCAGGACATCTCCTCCGCAGTCACTGCTGAC
AAGAACGTCGTTCACAGGGTTAAAGGCAAAAACCAAAACTATAGACACTCGATGCCGAAC
TTGCTGCTAGCGGAACAACCGCCCCTGGTCATAGAGAGGACCATCATGGAAGAGAATATC
AAGAGGAAGCCGTTCGTGTCGGAGGAACACATACAGAGTCACTTCGGAGTAGAGGAGAGC
AGGAAGATACTGTTCGACGACAGGCGACCAGCGGCCGGCGTCATGAGACCTCCGCAACCA
GTGCTGCCTCCCAAACCCAGGAGCAGGGACTCCATCGAGAGGGAGATCACCATGAGGAGT
AGTCGCGTCCCGTCGGCGGTGGAGTGTGTGCAGGTCCCCGTCCAGCGTGGACCGCGGGCC
CCGGACAGGCACACTCATGGACGGAACTACCACCCCATGTCGCGACACACGCTGCAGGTC
CTGAGCGCGGCGCCCACTCCCAAGCTGATCTCCAACTCTGAGTGGATGCAAGCGAGACCT
CAGCCCAGGCAGAAACAGAACAACTACAACTACAACCAACACTGGCTGATACAGGAAGCG
GAGCAACGTCGCATACAGGAGCAGCGTGCCGTACAACGTGTGCCGAACGTGCGGGACGGA
CGTGACGTCACCAACCTGATGGGGCGGGACGGACGAGCGAACGGTGTCCGCGCCTCACAC
GCACCTCACATCACACATTACGCTAACTCCCAAGTGATTCCTCAAGGCCGCAGCCTCGAG
CTCGGCGAGCGACGACCGGAGCATAGAGAGGATAAGATGCTGAGCGTGAGCGGCCGCAGG
AAGTGCTCGCACTGCGGGGACGAGCTGGGTCGCGGCGCCGCCATGATCATAGAGTCGCTG
TCCCTGTGTTACCACGTGTGGTGTTTCTCGTGCGCGGCGTGCGGGGCGCCGCTGGGCGAC
GGGCGCGCGGGCGCCGACGTGCGCGTCCGGGGGCGGAGTCTCCACTGCCACCAGTGCTAC
AGCTCCGACGACGGAGACAAGTACTCCTGCGTGTGA
Protein sequence:
MHCAGVGSAVEGNLALIKTRKSLPPFLCLADIADLQALKAGRRRRNPLALYTEDDGHDLS
DLGIGTSSTKSSLSEDCDTHSLASDGMDLDKNHSDVETISNCDNNRKLGSSANEYDTCTT
MTISSPEPEEYTYEGAIEGYKSRIISQTNSNIVKTVVNNNVKENTPEKTNGDINRIRTSV
SNKIEEKVSSFQHERANDLKNNNQKKDLPKVDIHKRREQFEREHSQELQLSKPKVPEIAN
KKSIKERLSCLEKFNEDIQLQKSTNDLAKLPGEVKPLKDRLNSLEKVKSANAETEKNKRL
SNGDLSNSKSLRERLTSLKSQKSEEEVKVTKTEVKEVSMSIKERLSCLDAAKNKEIPKIA
IEAEIISDDKIPEQTEHSELKDKLSNSSLKLNLAGIENQMQSFCRSLDSLDINDQSSPNS
FDRVQSLEDFDCAEMQNNTVPSDIETEDSGIHTARDSCAPADDIADLTQVASPIGEPMAE
VSEYESSNEYNDTIMTLEPAKTEKPIGMDSEPYQMNDEVQGNEEEDSDSGSNYLQAVSQP
EESSATEITEIQIDKEDEDTLKSLDNQDSSVSLNEPASTASEGDTVVFQGKMTIHVNLND
IRSSSGAGYCNTNNVANESTNNKGMVTVSNITTTTNISSKYSRPFQTNIKASSDTLNSDV
YIDDSSMHSRNINEGVPYTDTSHTDHGFHNCVQTPDSTHPEPRNKVVIDALELAFQELDS
EESVDVAMDDTISNTTTASDAKITDNVDDLLNFDVNKKVSVTPLYENIDIFNQNLVESSD
FPLDLPTNALEPPKEKPPPPPTEDGPDELLGNGNFKHTSSARRIKKEIRNKRTSFLGIEG
QDDSYLDVDLKLSPRPDITSFLQEETKIEKLLYKKTLSHDNAKLRDSRDSGVDVDRGSET
WYRGHSSPDTSSPHSRQNSEPYQMTVTSDEEEATKSAEQAFSKNLTTKLSGLTENGETQD
NKIDHLDKKIQQQQEVLRFERELLQLEQEELRRQRENLLRDQNRIIQKSVQDISSAVTAD
KNVVHRVKGKNQNYRHSMPNLLLAEQPPLVIERTIMEENIKRKPFVSEEHIQSHFGVEES
RKILFDDRRPAAGVMRPPQPVLPPKPRSRDSIEREITMRSSRVPSAVECVQVPVQRGPRA
PDRHTHGRNYHPMSRHTLQVLSAAPTPKLISNSEWMQARPQPRQKQNNYNYNQHWLIQEA
EQRRIQEQRAVQRVPNVRDGRDVTNLMGRDGRANGVRASHAPHITHYANSQVIPQGRSLE
LGERRPEHREDKMLSVSGRRKCSHCGDELGRGAAMIIESLSLCYHVWCFSCAACGAPLGD
GRAGADVRVRGRSLHCHQCYSSDDGDKYSCV