| Genomic Position | scaffold11391:- 636-2633 |
|---|---|
| See gene structure | |
| CDS Length | 1998 |
| Paired RNAseq reads | 49 |
| Single RNAseq reads | 124 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | Gag protein [Bombyx mori] (7e-67) |
| Best NR hit (blastx) | Gag protein [Bombyx mori] (2e-44) |
| GeneOntology terms | ND |
| InterPro families | IPR001878 Zinc finger, CCHC-type IPR013084 Zinc finger, CCHC retroviral-type |
| Orthology group | MCL10285 |
Nucleotide sequence:
ATGATGAGTGAGAGAGAGTATGATGGTGGGGGGGGTTCCCGGGGGGAAATACCGGGTAAG
GAGATGAATGAGAGTGTGTGTGCGGATGACTCAATGTCATCGCGCCCGGAATCGGTGTTA
GGAGCCAAACGGCTGTTCTCGGACGTATCTGGTTCCGACACCGAGACCGGGGGTGGGATG
TTTCGGGGTCCGGTAGTGTCGGGAAGGCGGGGCCGCGGCCGTACGCTGGCGAGAGCCCGC
AAATTTTTAAGGGAAAGGAAGGAGGAGGAGTCGGAGGCTGCCTTCGACTCCTGCCTCGAA
AAGAGGCTCCGAAAGGAGAGTGACGGGGGTGGGAAGGCGAAGGGGAAGGGGAGGGAGGTC
CCTTTGGACCTGCAAGCAATGGGGGCGGAGGCGATAAAGGTCGAGGCCGAGAAAAGCCTC
GACCTTATCAAAGAGTTGGTGGGAAAGAGTAGAAACCTCAAAGGGGGCTACTCGTCCCGA
ATTATGAAGGCCTCTGCCTTCCTGAGGGAGTCCCTGGATGCGCTCGTATCGCGCACCGAG
GCTGAAGAGACCCACCGCCTCAGAGCCGACATTGGTCGGCTCCAGAGGGAGAACGCGGGT
CTCAAAGAAGAGGTACGCGCTCACCGTCTCCAATACGAGGAGATGATGAGGGAGAGGGCG
GCGGCGGTTAAGGCAGGTGGGCCGGTCGGCCAGGACCAGCTTCAGGCGCTTGAAGCAAAC
ATCGCCAGGTTGGTGGGCAACCTGGTGGATGGACGGCTGACCGCGTTGGAGTCCCGGCTT
AGGCGGGAAGAGGTCGCCCGCCCTCCCCTGGCGGGAGATAACTCGGCCGTCGCCGTGGCT
GCCAGAGCGGCGATCCGCCAGGCGGCCATACAAAGAGGGGCCAAATCCTCAGCCCCTTTA
CCGGCGTCACCGGCACCGGTAATATTAGTGTCAGAGGATGATTTCCCTTCCCTCCCTGCG
CCCTCCAAGGGGAAGGCCAAGAAATCAAAGGGGGGGAAGGAGGTTGCCTGGACCGCCTTC
GGTCCATCCACCTCCGGTGGAAGGACTGAGGCGATAACTGCCGGGGCCGGGGCCGTTGCG
GCGGGGTGGACGGAGGTGGTCCGCCGCAAGGCCCTCAAAAAGAAGGAAGTGGTGCCGGTA
CCCAAAACACCGGCGCCACAACCAAAAAAGAAGGCGGGCCCTAAGGAGGGCCCCAAGAAA
GTGGCGCTCCCACGCTCACAGGCCGTAATGTTGAAGTTACGGCCTGAAGCAGCGGCTAAG
GGGGCGACCTACTTGTCGGTCCTCTTAAGGGCCGAGAGGGAGGTAAATACGAAGGAGCTG
GGTATCGGGCCCCTGAAAATCCGTTCATCGGCAACAGGGGCCCGCATCATCGAGGTGCCC
GGCTCAGCCAGCGCGGACAAAGCCGACGCTTTGGCCGCTAAGCTGAAGTCTGTGCTGGCG
GAGGAGGCGGAGGTGTCGAGGCCCGTGAAATTCACGGACGTAAGAGTAACGGGCCTCAAC
GACGCGACGACCGCGGACCGGCTGATAGCCGCGGTCGCGCAGGAGGGGGGCTGCACCGAG
GCCCAGGTCAGGGTTCGTAGCGTGCGACCTGGGCCTCGCGGCACAGGCTCCGCCCTGGTG
GAGGTGCCGGCTGCGGCGGCTAAAAAGCTGCTGCAGCTGGGCAGCCTGTCAGTCGGGTGG
AGCCAGGTGCGGCTCTCGCACATGGAGGCACGACCCAAGCACTGCTTCAAGTGCTTGGGA
ACGGGGCACGTTGCGGCCGCGTGCCCCAGTCCAAAAGACCGCAGCGGTTTGTGCTACCGC
TGCGGCAAGGAGGGCCACAAGTCCGCCCAGTGCTCCGCGTCACCGCGCTGCGCTGTGTGC
GCTGACGCGAGCAAGCCGGCGGACCATGTGATGGGGGGTCATTCGTGCCGCCCCCCATCC
ACCCGTGGGAAACTCCCGGTCCAGCCACAAAGGGCGGGGGTTTCGAGGCGGGCGTCGGGA
GCTGAGATGTCCGAATAA
Protein sequence:
MMSEREYDGGGGSRGEIPGKEMNESVCADDSMSSRPESVLGAKRLFSDVSGSDTETGGGM
FRGPVVSGRRGRGRTLARARKFLRERKEEESEAAFDSCLEKRLRKESDGGGKAKGKGREV
PLDLQAMGAEAIKVEAEKSLDLIKELVGKSRNLKGGYSSRIMKASAFLRESLDALVSRTE
AEETHRLRADIGRLQRENAGLKEEVRAHRLQYEEMMRERAAAVKAGGPVGQDQLQALEAN
IARLVGNLVDGRLTALESRLRREEVARPPLAGDNSAVAVAARAAIRQAAIQRGAKSSAPL
PASPAPVILVSEDDFPSLPAPSKGKAKKSKGGKEVAWTAFGPSTSGGRTEAITAGAGAVA
AGWTEVVRRKALKKKEVVPVPKTPAPQPKKKAGPKEGPKKVALPRSQAVMLKLRPEAAAK
GATYLSVLLRAEREVNTKELGIGPLKIRSSATGARIIEVPGSASADKADALAAKLKSVLA
EEAEVSRPVKFTDVRVTGLNDATTADRLIAAVAQEGGCTEAQVRVRSVRPGPRGTGSALV
EVPAAAAKKLLQLGSLSVGWSQVRLSHMEARPKHCFKCLGTGHVAAACPSPKDRSGLCYR
CGKEGHKSAQCSASPRCAVCADASKPADHVMGGHSCRPPSTRGKLPVQPQRAGVSRRASG
AEMSE