DPGLEAN21154 in OGS1.0

New model in OGS2.0DPOGS213448 
Genomic Positionscaffold4258:- 6485-8954
See gene structure
CDS Length1257
Paired RNAseq reads  1017
Single RNAseq reads  3821
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA008779 (4e-14)
Best Drosophila hit  CG5931 (3e-157)
Best Human hitU5 small nuclear ribonucleoprotein 200 kDa helicase (1e-154)
Best NR hit (blastp)  hypothetical protein TcasGA2_TC016163 [Tribolium castaneum] (2e-170)
Best NR hit (blastx)  hypothetical protein TcasGA2_TC016163 [Tribolium castaneum] (4e-163)
GeneOntology terms











  
GO:0030532 small nuclear ribonucleoprotein complex
GO:0005682 U5 snRNP
GO:0008380 RNA splicing
GO:0003724 RNA helicase activity
GO:0004004 ATP-dependent RNA helicase activity
GO:0005681 spliceosomal complex
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome
GO:0005634 nucleus
GO:0071011 precatalytic spliceosome
GO:0071013 catalytic step 2 spliceosome
GO:0000398 nuclear mRNA splicing, via spliceosome
InterPro families
  
IPR023290 Sec63-domain
IPR004179 Sec63 domain
Orthology groupND

Nucleotide sequence:

CTGCACTGCTACGAGCAGTACCCGGTGACGACGGTGCTGCAAATGCTGGGCCGGGCCTGC
AGACCTCTGGAAGACGAGCACGCAGTCGCAGTACTCATGTGCGCTCAGCATCACAAGACG
TTCTTCACGAAGCTTCTCAACGACTGCCTACCCTTAGAGGTATCTACTCCACATACACAT
CTCTCCGATCACCTGTCAGAGCTGGTCGAGTCAACCCTATCAGATCTGGAACAGTCGAAG
TGTATAGCCATCGAGGATGATATGGACCTGCAGCCTCTCAACCTTGGAATGATAGCCTCC
TACTACTACATAAACTACACTACTATAGAACTGTTCAGCTTGTCTCTGACTTCAAAGACG
AAGATCCGAGGTCTTCTGGAGATCATATCTTCAGCGGCGGAGTACTCCGAGCTGAGCGTC
AGGCATAGAGAGGAGAACGTCATCAAGACGCTCGCTGCCAAGGTGCCTCACAAATCGTCA
TCGCCGACAGTCCGCTACAACTCCCCCCACGTGAAGGCGCACGTGTTATTACAAGCTCAT
CTCTCAAGGATGCAACTTCCGGCGGAACTGCAGGCTGATACCGCCATTGTGCTCACAAAG
GCTATACGTTTGATCCAGGCGTGTGTGGACGTGGTTTCCAGCAGTGGCTGGCTATCCCCA
GCTGTTGCGGCTATGGAACTAGCGCAAATGGTGACCCAGGCTATGTGGGCGAAGGACTCC
TACCTCAAACAGCTGCCTCACTTCACCCCGGAACTGCTCCAACGGTGTTCCGAACGCGGG
GTTGATACGGTCTTCGATGTCATGGAACTCGAGGATTCAGCTCGCACGGAGCTGCTTAGG
CTCACGCCGACGGAAATGGCGGATGTGGCTAGATTCTGTAACAGATATCCGAATGTTGAG
CTGAGTTATGAGGTGTTGGATAGTAGGAGAGTGAGGAGTGGTGGGCCGGTAGTGTTGAAG
GTTACGTTGGAGAGGGAAGACGAGGTGACGGGGCCGGTCGCAGCGCCTAGATTCCCGCAG
AAGAGGGAGGAAGGTTGGTGGGTGGTGGTTGGAGAGCCGAGGACCAACAGCCTGTTGTCC
ATCAAACGGGTTCAGCTTGGGCGATCAGCTACTTTGAAGCTGGACTGGCTAGCCGGCGCG
CCGGGACGACACACCTACACTCTGTACTTCATGAGCGACGCTTACCTGGGAGCGGATCAG
GAATACAAGTTCAATGTGGATGTGTCCGATGCCAGGTCACCGGATAATGCAGACTGA

Protein sequence:

LHCYEQYPVTTVLQMLGRACRPLEDEHAVAVLMCAQHHKTFFTKLLNDCLPLEVSTPHTH
LSDHLSELVESTLSDLEQSKCIAIEDDMDLQPLNLGMIASYYYINYTTIELFSLSLTSKT
KIRGLLEIISSAAEYSELSVRHREENVIKTLAAKVPHKSSSPTVRYNSPHVKAHVLLQAH
LSRMQLPAELQADTAIVLTKAIRLIQACVDVVSSSGWLSPAVAAMELAQMVTQAMWAKDS
YLKQLPHFTPELLQRCSERGVDTVFDVMELEDSARTELLRLTPTEMADVARFCNRYPNVE
LSYEVLDSRRVRSGGPVVLKVTLEREDEVTGPVAAPRFPQKREEGWWVVVGEPRTNSLLS
IKRVQLGRSATLKLDWLAGAPGRHTYTLYFMSDAYLGADQEYKFNVDVSDARSPDNAD