DPGLEAN21171 in OGS1.0

New model in OGS2.0DPOGS211087 
Genomic Positionscaffold1895:+ 3440-11522
See gene structure
CDS Length2313
Paired RNAseq reads  5370
Single RNAseq reads  14380
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA002967 (0.0)
Best Drosophila hit  CG4389, isoform A (0.0)
Best Human hittrifunctional enzyme subunit alpha, mitochondrial precursor (0.0)
Best NR hit (blastp)  hydroxyacyl-coenzyme A dehydrogenase [Bombyx mori] (0.0)
Best NR hit (blastx)  hydroxyacyl-coenzyme A dehydrogenase [Bombyx mori] (0.0)
GeneOntology terms








  
GO:0016508 long-chain-enoyl-CoA hydratase activity
GO:0016509 long-chain-3-hydroxyacyl-CoA dehydrogenase activity
GO:0016507 fatty acid beta-oxidation multienzyme complex
GO:0006635 fatty acid beta-oxidation
GO:0050662 coenzyme binding
GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity
GO:0055114 oxidation reduction
GO:0004300 enoyl-CoA hydratase activity
GO:0005811 lipid particle
GO:0005875 microtubule associated complex
InterPro families





  
IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
IPR016040 NAD(P)-binding domain
IPR013328 Dehydrogenase, multihelical
IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding
IPR001753 Crotonase, core
IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal
IPR012803 Fatty acid oxidation complex, alpha subunit, mitochondrial
Orthology groupMCL12226

Nucleotide sequence:

ATGACATCTGTTGTCAACTCAGATGCCCCTCTTCCCCTCCTACCACCTACTGGCTGGCCC
TGTTTGCTCCTCATCTGTCGAGAAAGTTTAGGTTCAAAGTCTGGAACCTTGGCGGCTGCT
GCAACGTCTCATGTCCACACCAAGTGCAAATTGGTTAATGGTGTATATGTCATAACACTT
GATTCTCCAAATGTTAAGGTTAATTCCTTAAATCAAGACGTAATGGATGAAGTTAAATCA
ATCATTCAAGAAGTACAAAGTAATCCGGCAATCGAAGCTGCCGTTTTAATATCCGGCAAA
CCTGGGTGCTTTATAGCCGGTGCCGATATCAACATGATTGAACGCTGTAAAACAAAGGAA
GAAGTAGTTGCGTTATCCAAAAATGGTCATGACATCTTTAGGAGCATAGAAAATTCTACA
AAGCCTTATGTAGCAGCCATTCAAGGATCATGTCTCGGGGGCGGTCTGGAAACCGCATTG
GCTTGTAAATACAGAATTGCTGTGAAAGATAACAAAACAGCTCTGGCACTTCCCGAAGTT
ATGCTAGGTTTATTGCCTGGAGGTGGCGGCACTGTTAGGATGCCCAGACTAACTTCAGTT
CCTACGACTTTGGATCTTGCTCTGACTGGGAAAACTGTCAAGGCCGACAAAGCGAAGAAA
CTTGGGATGGTTGATTTGTTGGTATCTCCATTGGGGCCAGGCTTAGGACAACCCGAAGCT
AACACAATGGCATATTTAGAAAAAGTCGCCGTTCAAATTGCCAAAGACATTGCATCCGGA
AAAATGAAGGTAGAGAGGGGCAAGAAAGGTGTCGTCAATCAATTGATGGCCAGCGTCATG
GATGTAGAGTTTGTCAAGAATTTCATCTTCAAGAAAGCCAAGGATCAAGTCATGAAAGCA
TCTCGTGGGTTATACCCAGCACCCCTCAAGATTCTTGAAGTCGTCAGGACTGGTGTAGAT
AAAGGTCAGGCTGCGGGCTACGAGGCGGAAGCCCAGGGCTTCGGTGAACTGGCCATGACG
CCCCAGAGCAAAGGACTCATTGGACTCTTCAGAGGACAGACCGAGTGTAAGAAGAACAGG
TTCGGCAAACCTCAGAATGAAGTTAAGACGATCGGCGTCCTAGGCGCGGGTCTGATGGGC
GCTGGCATAGTTCAAGTGTCAGTGGACAAGGGTTACCAAGTAGTGTTAAAGGACGCCACT
ACAGCTGGCCTCTATCGCGGTATGGGTCAGATTCAAAATGGACTAGTCAACGCTGTCAAA
AGGAAGAGGATCTCATCGTTGCAAAAGGACAAGTTTGTTTCGAACCTATTGCCGACGTTA
GACTACAACAAGTTCAAAAACGCGGACTGCGTTATTGAAGCGGTGTTCGAAGACATCAAT
ATCAAGCACAAAGTTATCAAGGAATTGGAAGCGGTTGTGCCCAAGCATTGTGTACTGGCC
ACGAATACTAGTGCCATACCCATAACCAAAATCGCAGCCGGCAGTAGCCGCCCTGAGAAA
GTTATTGGCATGCACTATTTCTCCCCCGTGGACAAAATGCAGCTGTTAGAGATCATCCGT
CATCCTGGGACGTCTGATGACACTGCTGCGGCGGCTGTTGCTGTTGGCCTCAAACAGGGC
AAGGTTGTCATCACTGTCGGTGACGGACCGGGCTTCTACACGACAAGGATACTGTCCACC
ATGCTTAGCGAAGCCATTAGGCTGTTACAAGAGGGCGTTGATCCCAAGGATCTGGACAGC
ATGACAAAGCAGTTCGGCTTCCCCGTGGGCGCGGCCACACTCGCCGACGAGGTTGGCATT
GACGTTGGAGCACACATCGCTGTCGACTTAGCCAAGGCGTTTGGTGACCGCATCAGCGGT
GGGGATCTCAACATTATGCAAGACTTAGTCACAGCTGGCTTCATGGGCAGGAAGTCCGGC
AAAGGTTTCTACGTTTATGAGAAAGGCACCAAGAACAGGGATGTCAACCAAGATGCTGTA
AATATATTAAAGACTAAATACTCTCTGGAACCAAAAGGAGCAAATACTGTCGAAGACCAG
CAGCTGAGGATGGTGTCCAGATTTGTCAATGAAGCAGTTTTATCACTCGAGGAGAAAATT
TTACACAGTCCGCTTGAAGGTGACGTAGGCGCGGTCTTCGGTCTTGGATTTCCGCCATTC
ACTGGTGGACCATTCAGATGGGTAGACCAATTCGGTGCTGGAAAACTGGTAGCAAAAATG
GAGGAATTCCAAGCTCTATATGGCGCTCCGTTCAAACCCGCACAGACCCTGGTTGACATG
GCCAAAGATAGCAGCAAGAAATTCTATAACTAA

Protein sequence:

MTSVVNSDAPLPLLPPTGWPCLLLICRESLGSKSGTLAAAATSHVHTKCKLVNGVYVITL
DSPNVKVNSLNQDVMDEVKSIIQEVQSNPAIEAAVLISGKPGCFIAGADINMIERCKTKE
EVVALSKNGHDIFRSIENSTKPYVAAIQGSCLGGGLETALACKYRIAVKDNKTALALPEV
MLGLLPGGGGTVRMPRLTSVPTTLDLALTGKTVKADKAKKLGMVDLLVSPLGPGLGQPEA
NTMAYLEKVAVQIAKDIASGKMKVERGKKGVVNQLMASVMDVEFVKNFIFKKAKDQVMKA
SRGLYPAPLKILEVVRTGVDKGQAAGYEAEAQGFGELAMTPQSKGLIGLFRGQTECKKNR
FGKPQNEVKTIGVLGAGLMGAGIVQVSVDKGYQVVLKDATTAGLYRGMGQIQNGLVNAVK
RKRISSLQKDKFVSNLLPTLDYNKFKNADCVIEAVFEDINIKHKVIKELEAVVPKHCVLA
TNTSAIPITKIAAGSSRPEKVIGMHYFSPVDKMQLLEIIRHPGTSDDTAAAAVAVGLKQG
KVVITVGDGPGFYTTRILSTMLSEAIRLLQEGVDPKDLDSMTKQFGFPVGAATLADEVGI
DVGAHIAVDLAKAFGDRISGGDLNIMQDLVTAGFMGRKSGKGFYVYEKGTKNRDVNQDAV
NILKTKYSLEPKGANTVEDQQLRMVSRFVNEAVLSLEEKILHSPLEGDVGAVFGLGFPPF
TGGPFRWVDQFGAGKLVAKMEEFQALYGAPFKPAQTLVDMAKDSSKKFYN