New model in OGS2.0 | DPOGS200981  |
---|---|
Genomic Position | scaffold1091:- 29044-29940 |
See gene structure | |
CDS Length | 897 |
Paired RNAseq reads   | 1613 |
Single RNAseq reads   | 3707 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009048 (2e-150) |
Best Drosophila hit   | congested-like trachea, isoform D (1e-101) |
Best Human hit | mitochondrial carnitine/acylcarnitine carrier protein (2e-94) |
Best NR hit (blastp)   | mitochondrial carnitine/acylcarnitine translocase [Loxostege sticticalis] (7e-158) |
Best NR hit (blastx)   | mitochondrial carnitine/acylcarnitine translocase [Loxostege sticticalis] (1e-149) |
GeneOntology terms    | GO:0055085 transmembrane transport GO:0005743 mitochondrial inner membrane GO:0016020 membrane GO:0005215 transporter activity GO:0006810 transport GO:0005488 binding GO:0016021 integral to membrane |
InterPro families    | IPR023395 Mitochondrial carrier domain IPR018108 Mitochondrial substrate/solute carrier |
Orthology group | MCL15450 |
Nucleotide sequence:
ATGTCTGAAAATAGCAGTCCAATTAAATATTTCCTTAGTGGAGGTTTTGGTGGGGTGTGT
ACTGTACTAGCTGGACACCCTATGGACACAATCAAAGTAAGGTTGCAGACTATGCCTCTC
CCTAAACCTGGTGAAGTTGCTTTGTACGCTGGAACTTGGGATTGTTTTAAAAAAACTATA
CAAAAGGAAGGATTTCGCGGGCTTTATAAAGGAATGTCAGCTCCTCTGACAGGAGTCGCA
CCAATTTTTGCAATAAGTTTCTTCGGATTTGGACTTGGTAAAAAATTAATTAAGTCTGAC
GAAAATCAAGTTCTTACCAAGTCGGAACTGTTCGCAGCCGGTGCATTTTCTGGCATTTTC
ACTACTTCTATAATGGCGCCCGGTGAACGTATCAAATGTTTGCTACAAATTCAGCAAGGT
GGGAATGTACCTCAGAAGTATAATGGTATGCTTGACTGTGCCAGACAGCTATATGCAGAG
GGTGGTATAAGGAGTATTTATAAGGGCAGTGTGGCCACTATTTTAAGAGATGTGCCAGCC
AGCGGCATGTATTTCATGACCTATGAATGGGTCAAAGAAGTACTTGTGCCGGAGGATGCC
ACTGCTAAAGTTAAAATGATGGCAACCATCATTGCTGGTGGCTGCGCTGGTATAGCTAAC
TGGTTGGTAGGCATGCCAGCTGATGTTCTGAAAAGCAGATTACAAACGGCCCCAGAAGGT
ACATATCCTAATGGTATGAGAGATGTATTCAAACAGTTAATGGAGAGGGAGGGGCCTACG
GCGTTATACAAGGGTGTAACACCTGTCATGATAAGAGCTTTCCCAGCCAATGCCGCTTGT
TTCGTCGGATTCGAGTTAGCTGTTAACTTCCTTAACTGGATCGCGCCCAATCTTTGA
Protein sequence:
MSENSSPIKYFLSGGFGGVCTVLAGHPMDTIKVRLQTMPLPKPGEVALYAGTWDCFKKTI
QKEGFRGLYKGMSAPLTGVAPIFAISFFGFGLGKKLIKSDENQVLTKSELFAAGAFSGIF
TTSIMAPGERIKCLLQIQQGGNVPQKYNGMLDCARQLYAEGGIRSIYKGSVATILRDVPA
SGMYFMTYEWVKEVLVPEDATAKVKMMATIIAGGCAGIANWLVGMPADVLKSRLQTAPEG
TYPNGMRDVFKQLMEREGPTALYKGVTPVMIRAFPANAACFVGFELAVNFLNWIAPNL