New model in OGS2.0 | DPOGS201030  |
---|---|
Genomic Position | scaffold1091:+ 31001-33902 |
See gene structure | |
CDS Length | 1209 |
Paired RNAseq reads   | 272 |
Single RNAseq reads   | 786 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009112 (5e-137) |
Best Drosophila hit   | Marcal1 (4e-77) |
Best Human hit | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 (7e-51) |
Best NR hit (blastp)   | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (3e-99) |
Best NR hit (blastx)   | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (1e-96) |
GeneOntology terms    | GO:0004386 helicase activity GO:0005524 ATP binding GO:0016568 chromatin modification GO:0005634 nucleus GO:0003677 DNA binding |
InterPro families    | IPR014001 DEAD-like helicase IPR000330 SNF2-related IPR010003 HepA-related |
Orthology group | MCL11905 |
Nucleotide sequence:
ATGGAATGTACGAAGGAACAAATTGAACAGAAACGGTTAGCAGCTTTGCAGAAAAGATTA
TCCAAAAATAATAACCACGTCCCTCATGCGCCCCAATGCACGAAACCGTCAGATCAACCA
GAACATTTAAAACAGGGGCAGTCAAAAAACAATTCTGCTCATACTTTTCATCCATACTCA
AGACCAAATAGTAGCAAACAATTTACTTCGACGGTTCCAGTATCTAATGTTGTCACAGGA
TCCGTATATTTGATATCTGAAGACAGATTTGAAGTAAACATGTCAGAATTTTGCCCTCCA
CTTATAAATATCTTCAAAACTTTAAGATCAAGGTCATATGATTCAAACACTAAGTTGTGG
AATTTTTTAATGAGTGATTATGAGAATCTGATGTCCAAAGTTACACCGCTCGCGCCTCAC
ATTGTTATAGGTCCCCTACCAGCATTTGTTTTGAAGATTCTGAATGATCCTCCCATTGAT
CATAGTGCTGTGGATTTAACACCAATCGAAGCAACACTAAGAAATAAACTGTTACCATTC
CAGGAGGAAGGTGTCAGATTTGGAATAGCGCGTAAGGGTCGATGTCTTATAGCTGACGAC
ATGGGACTCGGGAAGACGTTTCAAGCTCTTGCGATAGCTAGTTACTACCGGCATGACTGG
CCCTTACTGATTGTCACTACTTCTTCAATGAGAGAAACATGGCAAAACAAAATCAGCGAG
CTTCTGCCATCGGTGCCGTTGGTAAACGTGGCTACTCTAACAAGCAACAAAGACGTCAAT
TTCGTTTCCGATAGACAGGTCGAGGTTGTCATAGTTAGCTATAAGATAATAAGTCTGCAC
ACGGAGCTGCTGAGGCAGAAGAGGTTTGGATTCGTCATAGTTGACGAGTCTCACCACCTG
AAGTCACCCAAGGCTCAGTGTACGAGTGCCCTGTTCAAGCTATGTGGCCAGGGTCGTGCA
GTACTCCTCAGCGGGACCCCCGCCCTCAGTCGACCCGTCGAACTCTACACCCAGCTGTCT
CTACTAGAGCCGAGACTTTTCACTTACACGGAATACGGTAAGAGATATTGCGACGCGAAA
CAAACAAACTTCGGTTGGGACATGACCGGCAAGTCGAATTTGGCGGAGCTGCTCGTTATA
TTACAAAGGAGATTCCTCATCCGCCGCACCAAAGAACAGGTCCTCAATCTAGAAGAGAAG
ACTCGGTGA
Protein sequence:
MECTKEQIEQKRLAALQKRLSKNNNHVPHAPQCTKPSDQPEHLKQGQSKNNSAHTFHPYS
RPNSSKQFTSTVPVSNVVTGSVYLISEDRFEVNMSEFCPPLINIFKTLRSRSYDSNTKLW
NFLMSDYENLMSKVTPLAPHIVIGPLPAFVLKILNDPPIDHSAVDLTPIEATLRNKLLPF
QEEGVRFGIARKGRCLIADDMGLGKTFQALAIASYYRHDWPLLIVTTSSMRETWQNKISE
LLPSVPLVNVATLTSNKDVNFVSDRQVEVVIVSYKIISLHTELLRQKRFGFVIVDESHHL
KSPKAQCTSALFKLCGQGRAVLLSGTPALSRPVELYTQLSLLEPRLFTYTEYGKRYCDAK
QTNFGWDMTGKSNLAELLVILQRRFLIRRTKEQVLNLEEKTR