| New model in OGS2.0 | DPOGS202902 |
|---|---|
| Genomic Position | scaffold334:- 55690-61164 |
| See gene structure | |
| CDS Length | 711 |
| Paired RNAseq reads | 2329 |
| Single RNAseq reads | 5633 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004175 (2e-66) |
| Best Drosophila hit | adam (5e-22) |
| Best Human hit | eukaryotic translation initiation factor 3 subunit J (2e-16) |
| Best NR hit (blastp) | eukaryotic translation initiation factor 3 subunit J [Bombyx mori] (4e-76) |
| Best NR hit (blastx) | eukaryotic translation initiation factor 3 subunit J [Bombyx mori] (2e-55) |
| GeneOntology terms | GO:0003743 translation initiation factor activity GO:0006413 translational initiation GO:0005852 eukaryotic translation initiation factor 3 complex |
| InterPro families | IPR023194 Eukaryotic translation initiation factor 3-like domain IPR013906 Translation initiation factor eIF3 subunit |
| Orthology group | MCL12480 |
Nucleotide sequence:
ATGGACGTGTCGTGGGATGCTGATAATTTTGAACCAAAACTTCCGACCACGTTGGCTTCC
AATAAATGGGAAGGCGAGGACGAGGAAGAAACAGTCAAGGACAGCTGGGAGGATGAAGAA
GAAGAAAAGAAAGACGAAGAAAAGAAAGAAACCGTGCCGCCTCCTCCGAAACCTAAAAAG
AAAATTCTAGATAAAATTGCTGAAAAAGAGCGTCTGGAACGTCAGAAGTCAGTGAAACAA
GTTGTCGAGAAAGAAGAATTGACCCCGGAAGAGAAGCTGGCTGAGAAGCTGCGTCAGCAG
AAATTACAAGAGGAATCCGATTTACTGCTGGCCTTGGAGACATTTGGTGTAACAGACGGA
GCCGGTAAACTAGATTGCTTCCATCCAACAAATAAACAGGAGTTCACAGATTTTGCAGAG
CTTCTGTGCAAAAAAATCAACATTTACAAAGCCAAGGATGAATTTCCCGGATTTGTTGAT
GAGCTGGTCAAGAATATTATAGTACAAATGTCGTCCGCGGATATTAAGAGGATAAAGATG
ACAGTCGACAATCTGTACATTGAAAAACAGAAAGCCGAGAAAAACGAAAAGGCCAAGAAA
CCTAACAAGGGGAAGGGGAAGGCTAAGTTAAAAGTGGAGGGGGAGAGTGCTCACTTGAAC
CAGTACGAGGCCTATGGCACTTTTGACGACGATTTCGACGACTTTATGTAA
Protein sequence:
MDVSWDADNFEPKLPTTLASNKWEGEDEEETVKDSWEDEEEEKKDEEKKETVPPPPKPKK
KILDKIAEKERLERQKSVKQVVEKEELTPEEKLAEKLRQQKLQEESDLLLALETFGVTDG
AGKLDCFHPTNKQEFTDFAELLCKKINIYKAKDEFPGFVDELVKNIIVQMSSADIKRIKM
TVDNLYIEKQKAEKNEKAKKPNKGKGKAKLKVEGESAHLNQYEAYGTFDDDFDDFM