New model in OGS2.0 | DPOGS211906  |
---|---|
Genomic Position | scaffold492:+ 74703-78333 |
See gene structure | |
CDS Length | 1689 |
Paired RNAseq reads   | 53 |
Single RNAseq reads   | 220 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001101 (1e-16) |
Best Drosophila hit   | CG7742 (5e-129) |
Best Human hit | TBC1 domain family member 19 (2e-89) |
Best NR hit (blastp)   | PREDICTED: similar to CG7742-PA isoform 2 [Apis mellifera] (4e-180) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC007094 [Tribolium castaneum] (7e-174) |
GeneOntology terms    | GO:0005097 Rab GTPase activator activity GO:0005622 intracellular GO:0032313 regulation of Rab GTPase activity |
InterPro families   | IPR000195 Rab-GAP/TBC domain |
Orthology group | MCL14828 |
Nucleotide sequence:
ATGGAAAGTATAAAAGATGACGCGATACATAACACTGCTATGAAACTAGCAGAGGAATTA
AAAAATCTTTCTATATATAAATCGATTTATAGTGATGTTCAGAAATTAGTTTCCTCACCA
AATGTAAACAAAGAAGATTTTAAACAAAGTTTACAACAGGCTATGAAAGAAAAGGGCTTA
GACACAAAGCTAAGGAACACCGTCTTTCATTGGGTTAGAACACAGGGTAAACAAAGTAAG
TTAGATCCGTTAACGTCGTTGTCAAAAGCAAGTCTGCAATGGGAGAAACGAATACACAAG
TCGCTTAATTCAATGTGTTCAGATCTTGAGACATCACTAGCAAAAATACGATCTCAGAGC
GAACAAGAAGAACTTACGGAGAAATGGAATGAACTTAGCACTTACAGTTTAGATTTATCA
AAATATAGACCAGTTTACGCGCCAAAAGACTTTTTAGACGTTTTACTGACTTTATCAGGT
TACGTTCCGTTTACAAGAGAAGACGAACCGAAATGGGAATTCTCACATCTACCTCTACAA
GTAAAAAATTTGGAGCAATTGAGAAAAATCTACGTGGAGTGGTGTAATGGTGAACCGTTA
CTGGGAGTGAATCCTAATATGCCCAGCACTGTGCCCGGTTTCGCCACTCTAGAGGCCGAA
CGCATCGGTCTAGGAGAGAGAGTCTCTGCTCTGGGATACGCTCCTGTCATACAGGAGTTC
CTGAAGAAGGGAAGCCCACAGTGTTTGCGAGCGAGACTCTGGTCTCAGGTTTTGGGGGCG
GAAGTTAAACAGCAGCAAATAGCGTACTTCAATCAGTTACAGAAGAGCGTTTTGGAAGTT
GACTTGATGATCGACAAGCTTATATTTAAGGATGTTCAATTAACCGCCTCGAATGATGAC
CAGTACTTCGTGTTCGAAGACTTACTGTATCAGTCTGATAGTAGATTTACACTCGAGTAT
GAGTCGCGAGCCGAAGCACAAGGTGAGAGTGTAAATAGTCGCTCGCTTCCCGCCTCGTGT
CTTGTCTCGCGACTCGCAGCGCTCGCATCCGGAGGTGCGAGCTGTGGTACGAGGCGAAGC
ACAAGACGAGTGATGTTGTGTTTCTCTCGCGACGGGGAGGTGTTGTCCCGCGCTCGCTCG
ACCGCGTTGACGGTACCGGTGCGGGGTCGGAACGAGAGGACCGCCTTCCCGCCCAGCGGA
GTGGTGCCATTCCATGGCTTCACCATGTACGCGACGCCATTTTGTTATCTTTACGACGAC
CCGGTCCAACTCTACTACATATTTCGCGCCTTTTATATTCGTTACTGGCACAGACTGCAC
TACATTTCAACGCATCCACAGGGTATAGTCTCATTATGTCTTCTTTACGAGAGGTTACTG
GAAGCTCACGAACCTTTGCTGTGGATACATTTCCGTAACATTAATATAAATCCCATCCGG
GTTGTGTTTAAATGGATAATGCGAGCTTTCAGCGGACATCTGCCGCCGGACCAACTCTTA
CTTCTCTGGGACTCGATACTCGGATACGATTGTTTGGAAATTTTACCTCTATTAGCTGTA
GCCATATTGAGTTTCAGAAAGGAAAATATTTTTCAGGTAAACACGTTACAAAATGTCGAT
GCTGTGCTAGCGGACCTGTCGACCATATCGGTCGTACCTTTATTACAATTGGCTTTGATG
AAGTCGTAA
Protein sequence:
MESIKDDAIHNTAMKLAEELKNLSIYKSIYSDVQKLVSSPNVNKEDFKQSLQQAMKEKGL
DTKLRNTVFHWVRTQGKQSKLDPLTSLSKASLQWEKRIHKSLNSMCSDLETSLAKIRSQS
EQEELTEKWNELSTYSLDLSKYRPVYAPKDFLDVLLTLSGYVPFTREDEPKWEFSHLPLQ
VKNLEQLRKIYVEWCNGEPLLGVNPNMPSTVPGFATLEAERIGLGERVSALGYAPVIQEF
LKKGSPQCLRARLWSQVLGAEVKQQQIAYFNQLQKSVLEVDLMIDKLIFKDVQLTASNDD
QYFVFEDLLYQSDSRFTLEYESRAEAQGESVNSRSLPASCLVSRLAALASGGASCGTRRS
TRRVMLCFSRDGEVLSRARSTALTVPVRGRNERTAFPPSGVVPFHGFTMYATPFCYLYDD
PVQLYYIFRAFYIRYWHRLHYISTHPQGIVSLCLLYERLLEAHEPLLWIHFRNININPIR
VVFKWIMRAFSGHLPPDQLLLLWDSILGYDCLEILPLLAVAILSFRKENIFQVNTLQNVD
AVLADLSTISVVPLLQLALMKS