| Genomic Position | scaffold5681:+ 1136-2499 |
|---|---|
| See gene structure | |
| CDS Length | 1248 |
| Paired RNAseq reads | 19 |
| Single RNAseq reads | 175 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013329 (1e-14) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (0.0) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (1e-169) |
| GeneOntology terms | GO:0003964 RNA-directed DNA polymerase activity GO:0003723 RNA binding GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGATAGTTGGGGGGGACTTAAATGACCACGTAGGTATGGCTGCGGATACGTTTGAGTGT
GTACACGGTGGTTTTGGTTATGGTCGCCGCAATGCAGAGGGAGAAAATATTCTCGGAACC
TGTATTGCGTCTGACTTAGCCGTCGTGAACACATTCTCCCAAAATCCTCCGCAGCACCTT
ATCACGTATAAGAGCGGATCCCACTCAACTCAAATAGATTATCTGCTGACCAGACGGTGT
CATATCGGCAAGGTGACTGACTGTAAAGTCATTCCTGGTGAAAGCCTGACGGCCCAACAT
CGCCTTCTTGTTATGGACTATGTCGTCACCCTGAAAAAGAAAGTAGCCGAGAAATGTAAG
CCTCGGATCAGGTGGTGGGCAGAGGTTGAGAGTCAAAATCTGTCGACTTATACTGAAACT
GCTCAGGATGTATGGGATCGAGCCCAGTCAGCAATTATCACAGCAGGTAAACGAGTTTTA
GGCCTTTCTAGGGGAGGACGGGTCATCGATAGGGAGACATGGTGGTGGAATGACGAAGTG
CAGAAGGTGATTCGTAAAAAGAAGACTGCCTTTAAGAATTGGCAGCAATCAAACTCTCCT
GAAGACAGACTAGAATACATAGTAGCGAAACGTGCCAGTAAAAGGGCTGTTGCTAGAGCC
CGCATTGACAAATTCCCAGTGAAGGAGAGATGGAGATGCTTCTTCAAGGAGTTATTAAAT
ACTCAGCACCGATGCAGTCTTCTAGCCGAACCACCTCCTAATCTTGGACTTACTGCCCCG
ATAACACCCGACGAAACTCGGAATTGTCTTCGACGCATGAAGAATCGGAAAGCGGTGGGA
CCTGACGATATTCCGATCGAAGTGTGGAAATCATCGGGCTCTCTTGGTGTGCTTATATTG
ACGGACCTTTTTAACCGCATCTTGAAAACCGGGACTATGCCACATCAGTGGCGTTACAGC
TACATTGCCCCTGTTTACAAAGGCAGGGGCAGTGTTCAAGATTGTGGTAGTTATAGGGGC
GTTAAGATCATGAGTCACACCATGAAGCTCTTTGAGCGCATGATCGACCTCAGGCTTCGC
CGAGAATGTACTGTATCAAAATGTCAATATAGATTTCAGCCAGGATCGGGCACCTTGGAC
GCCTTTTTTGCCATCAGAACTCTGATGGAGGCATACAGGGAAAAAAGGAGAGCTTTGCAT
GTCGCATTCCTAGATCTGCAGAAGGCCTTTGACTGCGTGCCTCGTTAA
Protein sequence:
MIVGGDLNDHVGMAADTFECVHGGFGYGRRNAEGENILGTCIASDLAVVNTFSQNPPQHL
ITYKSGSHSTQIDYLLTRRCHIGKVTDCKVIPGESLTAQHRLLVMDYVVTLKKKVAEKCK
PRIRWWAEVESQNLSTYTETAQDVWDRAQSAIITAGKRVLGLSRGGRVIDRETWWWNDEV
QKVIRKKKTAFKNWQQSNSPEDRLEYIVAKRASKRAVARARIDKFPVKERWRCFFKELLN
TQHRCSLLAEPPPNLGLTAPITPDETRNCLRRMKNRKAVGPDDIPIEVWKSSGSLGVLIL
TDLFNRILKTGTMPHQWRYSYIAPVYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLR
RECTVSKCQYRFQPGSGTLDAFFAIRTLMEAYREKRRALHVAFLDLQKAFDCVPR