| New model in OGS2.0 | DPOGS208462 |
|---|---|
| Genomic Position | scaffold1568:+ 20424-30577 |
| See gene structure | |
| CDS Length | 3354 |
| Paired RNAseq reads | 2738 |
| Single RNAseq reads | 7648 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010644 (6e-162) |
| Best Drosophila hit | aubergine, isoform A (3e-136) |
| Best Human hit | piwi-like protein 1 isoform 1 (4e-105) |
| Best NR hit (blastp) | aubergine protein [Bombyx mori] (0.0) |
| Best NR hit (blastx) | aubergine protein [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0048477 oogenesis GO:0046843 dorsal appendage formation GO:0017145 stem cell division GO:0007282 cystoblast division GO:0046011 regulation of oskar mRNA translation GO:0046012 positive regulation of oskar mRNA translation GO:0006446 regulation of translational initiation GO:0007279 pole cell formation GO:0043186 P granule GO:0005737 cytoplasm GO:0030717 karyosome formation GO:0046594 maintenance of pole plasm mRNA location GO:0001556 oocyte maturation GO:0030423 targeting of mRNA for destruction involved in RNA interference GO:0016246 RNA interference GO:0006342 chromatin silencing GO:0007317 regulation of pole plasm oskar mRNA localization GO:0007318 pole plasm protein localization GO:0003723 RNA binding GO:0010529 negative regulation of transposition GO:0005875 microtubule associated complex GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071013 catalytic step 2 spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR012337 Ribonuclease H-like IPR003100 Argonaute/Dicer protein, PAZ IPR003165 Stem cell self-renewal protein Piwi |
| Orthology group | MCL10296 |
Nucleotide sequence:
ATGTCTGAGAGGGGTCGCGGACGCGCTAGAGGCCGGGCAGGTCGTGGTGGAGATGGAGCT
ATGCAGCCGCCTCGGAGGCCCGGAGAGCAACCTCCTCAACAAGCTGGGGCTCCCAGACCT
CGGCCTCAACCGCCGTTGGCTTGGGGTCCTCCATCCGTAGTCCCGCCAGTCAGGGCTGGT
ATGCCCACACAGTCCGTAGGCCGAGCATCGCATCGTACCACTCCATCCACTCACGATCAC
CCAGGAGATGTTGATATACAACAACGAATGCAATCAGTTGCATTAGGTCCATCACAGTCA
TCTGGTGGTGGTGATGTTGGGACTGTGGTAGGACGTGGTTCCCGTCGAGGCGGAGGAAGA
GTTCTGCCTGAACAAATGACCATTGTTCGGACACGTCCAGAGACTGTGACCTCCAAGAAA
GGAAGCACTGGAGCTCCGTTAGACCTCTGTGCTAACTATTTCACCATTCAGACAACTCCT
CAGTGGTCACTCTATCAGTACCATGTGGATGTTGACCCCGAAGAGGACAATACTGCTGTG
AGAAAAGGTCTCCTACGCATTCACGCTAAAACTTTGGGAGGGTACCTATTTGATGGAACT
AACTTATACACTGTCAAAAAACTGCACCCAGACCCAATGGAACTATACTCACAGAGAACA
ACCGATGGTGAAAATATGAGATTGCTAATTAAGCTCACAGGTCAAGTGAGTCCTGGTGAT
TATCACTATATACAGATATTCAACATCATGATAAGGAAATGTTTCCGTATTCTGGATTTA
AAACTCATGGGTAGAGATTTCTTTGATCCAATAGCTAAGATTGACATTCCGGAACATCGT
TTACAAGTGTGGCCCGGATACAAGACTAGTATTAATCAGTACGAAGATCGTATCCTCATG
GTCACTGAGATCACTCACAAAGTCCTACGTTTAGATACGGTTCTTGAAATGCTCAAGGAG
TACACGTATCAGTATAAAGGTGACACATATAGGAAAATGTTCTTGGAAGATATTGTCGGC
AAGATTGTTATGACGGATTACAACAAAAAGACATATAGAGTTGATGATGTTGCTTGGTCT
GAGACACCGAAGTCTACTTTCAGGATGAAAGATCAAGATGTATCGTACTTGGACTACTAT
AATTTGAAATATAAAATCAGGATCCAAGATCCCGGCCAGCCTTTGTTGATCTCTCGTTCC
AAGGAGCGTGATATAAAGCGTGGTATGCCTGAACTGGTTTACCTCGTGCCGGAGCTGTGT
CGCCAAACGGGTCTCACTGATCAGATGCGAGCTAACTTTCAATTGATGCGAGCTCTGTCT
ACACACACCAAGATCGGTCCGGACATGCGTATACAGAAGCTACTTAATTTCAACCGCAGA
TTTACTCAGACTAAGGAAGTTGTTGAGGAACTGGGGACTTGGTCATTAAAACTATCGAAT
GACTTGGTGAGGTTCAAAGGTCGTCAATTACCAGCCGAACAAATCATCCAAGGAGGCAAC
ATGAAGTACCCAGCTGGTGATACAAACGACGGCTGGACTAGAGATATGAGGTCTAAGAAT
CTGTTCTCGGTCGCTAATATGCCGTCCTGGGTAGTCATAACGCCTTCGCGCCAACAGAAC
GATTCACAAAAATTCGTAGATTTGATCATGAAGACCGCTTCCGGTTGCGGATTTAGAATG
CCCAGACCGGAAATCGTGACCATACAACAGGACAGCCAATCCGCATACGCCAATATGTGC
GAAAACGTCATAGCTAGAAAAAATCCAGCTATGATATTGTGTGTATTGGCTAGGAATTAC
TCGGACAGGTACATTTCAACAATAAATAATCTCGGCGGCGCTCCATGGACGGTGGAAATC
CCCTTGCCTACACTGATGGTGATCGGATACGACGTGTGTCACGACACGCGTTCTAAGGAG
AAGAGTTTCGGAGCTTTGGTCGCTACGTTGGACAGACAAATGACTCAGTACTACTCTTGT
GTTAACGCGCACACCTCGGGAGAAGAACTCAGTTCACATATCGCCTTCAACGTAGCGTCG
GCTGTACGGAAATATAGAGAGAGAAATGGCTTCCTGCCCGGACGTATCTTTATATACCGA
GACGGCGTAGGCGACGGACAAATCGCATATGTGAAAAGCCATGAAGTAGCGGAAGTGAAA
GCTAAGCTGGCTGAGATATACGGCGGCGGGGATATCAAAATGGCGTTTATCATTGTGTCT
AAGCGTATCAACACGCGAGTGTTCGTGGACTGCGGCCGTAGTGGAGAGAACCCTCGCCCC
GGGACCGTGGTCGATGATGTGGTCACACTACCTGAGAGGTCTGTTCAAATCTATGTCGCT
CTAGTAACTAAAGCTACATCTCAAAGGTTTCAGGACAGCCAGTCCGCATACGCCAATATG
TGCGAAAACGTCATAGCTAGAAAAAATCCAGCTATGATATTGTGTGTATTGGCTAGGAAT
TACTCGGACAGATATGAAGCGATCAAGAAGAAATGCACTATCGACCGCGCGGTGCCCACG
CAAGTCGTCTGCGCTAGGAACATGACAAGCAAATCGGCCATGTCCATCGCTACCAAAGTG
GCCATACAAATCAACTGCAAGCTCGGCGGCGCTCCATGGACGGTGGAAATCCCCTTGCCT
ACACTGATGGTGATCGGATACGACGTGTGTCACGACACGCGTTCTAAGGAGAAGAGTTTC
GGAGCTTTGGTCGCTACGTTGGACAGACAAATGACTCAGTACTACTCGTGTGTTAACGCG
CACACCTCGGGAGAAGAACTCAGTTCACATATCGCCTTCAACGTAGCGTCGGCTGTACGG
AAATATAGAGAGAGAAATGGCTTCCTGCCCGGACGTATCTTTATATACCGAGACGGCGTA
GGCGACGGACAAATCGCATATGTGAAAAGCCATGAAGTAGCGGAAGTGAAAGCTAAGCTG
GCTGAGATATACGGCGGCGGGGATATCAAAATGGCGTTTATCATTGTGTCTAAGCGTATC
AACACGCGAGTGTTCGTGGACTGCGGCCGTAGTGGAGAGAACCCTCGCCCCGGGACCGTG
GTCGATGATGTGGTCACACTACCTGAGAGATACGACTTCTATCTAGTCTCCCAAAACGTC
AGAGAGGGAACGATAGCTCCGACATCATACAACATTATAGAGGACACTTCCTGCTTAGAT
CCGGATCGAATCCAACGCCTCACCTACAAGCTGACCCACATGTATTTCAACTGCTCGACA
CAAATCCGCGTGCCGTCTGTGTGTCAATACGCCCACAAGCTGGCCTTCCTAGCGGCCAAC
AGCCTCCACAACGCGCCCCATCACTCGTTGGCCGACACTCTGTACTTCCTATAA
Protein sequence:
MSERGRGRARGRAGRGGDGAMQPPRRPGEQPPQQAGAPRPRPQPPLAWGPPSVVPPVRAG
MPTQSVGRASHRTTPSTHDHPGDVDIQQRMQSVALGPSQSSGGGDVGTVVGRGSRRGGGR
VLPEQMTIVRTRPETVTSKKGSTGAPLDLCANYFTIQTTPQWSLYQYHVDVDPEEDNTAV
RKGLLRIHAKTLGGYLFDGTNLYTVKKLHPDPMELYSQRTTDGENMRLLIKLTGQVSPGD
YHYIQIFNIMIRKCFRILDLKLMGRDFFDPIAKIDIPEHRLQVWPGYKTSINQYEDRILM
VTEITHKVLRLDTVLEMLKEYTYQYKGDTYRKMFLEDIVGKIVMTDYNKKTYRVDDVAWS
ETPKSTFRMKDQDVSYLDYYNLKYKIRIQDPGQPLLISRSKERDIKRGMPELVYLVPELC
RQTGLTDQMRANFQLMRALSTHTKIGPDMRIQKLLNFNRRFTQTKEVVEELGTWSLKLSN
DLVRFKGRQLPAEQIIQGGNMKYPAGDTNDGWTRDMRSKNLFSVANMPSWVVITPSRQQN
DSQKFVDLIMKTASGCGFRMPRPEIVTIQQDSQSAYANMCENVIARKNPAMILCVLARNY
SDRYISTINNLGGAPWTVEIPLPTLMVIGYDVCHDTRSKEKSFGALVATLDRQMTQYYSC
VNAHTSGEELSSHIAFNVASAVRKYRERNGFLPGRIFIYRDGVGDGQIAYVKSHEVAEVK
AKLAEIYGGGDIKMAFIIVSKRINTRVFVDCGRSGENPRPGTVVDDVVTLPERSVQIYVA
LVTKATSQRFQDSQSAYANMCENVIARKNPAMILCVLARNYSDRYEAIKKKCTIDRAVPT
QVVCARNMTSKSAMSIATKVAIQINCKLGGAPWTVEIPLPTLMVIGYDVCHDTRSKEKSF
GALVATLDRQMTQYYSCVNAHTSGEELSSHIAFNVASAVRKYRERNGFLPGRIFIYRDGV
GDGQIAYVKSHEVAEVKAKLAEIYGGGDIKMAFIIVSKRINTRVFVDCGRSGENPRPGTV
VDDVVTLPERYDFYLVSQNVREGTIAPTSYNIIEDTSCLDPDRIQRLTYKLTHMYFNCST
QIRVPSVCQYAHKLAFLAANSLHNAPHHSLADTLYFL