| New model in OGS2.0 | DPOGS211278 |
|---|---|
| Genomic Position | scaffold535:- 50580-51135 |
| See gene structure | |
| CDS Length | 387 |
| Paired RNAseq reads | 12 |
| Single RNAseq reads | 286 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012459 (7e-50) |
| Best Drosophila hit | TBP-associated factor 13 (6e-47) |
| Best Human hit | transcription initiation factor TFIID subunit 13 (2e-42) |
| Best NR hit (blastp) | TBP-associated factor 13 isoform 2 [Bombyx mori] (4e-59) |
| Best NR hit (blastx) | TBP-associated factor 13 isoform 2 [Bombyx mori] (8e-49) |
| GeneOntology terms | GO:0016251 general RNA polymerase II transcription factor activity GO:0006367 transcription initiation from RNA polymerase II promoter GO:0005669 transcription factor TFIID complex GO:0003677 DNA binding |
| InterPro families | IPR003195 Transcription initiation factor IID, 18kDa subunit IPR009072 Histone-fold |
| Orthology group | MCL14808 |
Nucleotide sequence:
ATGGCAACTCCGTCTTCTGATACTGCAGATCAATTTGATCAATTTGATGACGAAGAAGCA
GAACAACAATTGGGTGCTACAGCATCTGGTAGGAAAAGACTTTTCAGCAAAGAACTGCGA
TGTATGATGTACGGTTTCGGCGATGATAAGAATCCATATACAGAAAGCGTCGATTTCTTA
GAAGATCTTGTCATTGAATTTATTACAGAAACTACACATAAAGCTATGGAAGTTGGTAGA
CCAGGAAGGGTTCAGGTGGAAGATATAATATTTTTGGTGCGTAAAGATCCTCGAAAATAT
GCAAGAGTAAAGGATTTGTTAACTATGAATGAAGAGCTCAAGAAAGCTAGAAAAGCTTTT
GATGAAGTCAAATATGTTGGTAAGTAA
Protein sequence:
MATPSSDTADQFDQFDDEEAEQQLGATASGRKRLFSKELRCMMYGFGDDKNPYTESVDFL
EDLVIEFITETTHKAMEVGRPGRVQVEDIIFLVRKDPRKYARVKDLLTMNEELKKARKAF
DEVKYVGK