| New model in OGS2.0 | DPOGS210736 |
|---|---|
| Genomic Position | scaffold1755:- 7230-10656 |
| See gene structure | |
| CDS Length | 1410 |
| Paired RNAseq reads | 786 |
| Single RNAseq reads | 1935 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006267 (1e-171) |
| Best Drosophila hit | CG13605 (6e-38) |
| Best Human hit | RING finger and transmembrane domain-containing protein 2 isoform 1 (7e-33) |
| Best NR hit (blastp) | PREDICTED: similar to CG13605 CG13605-PA [Tribolium castaneum] (3e-90) |
| Best NR hit (blastx) | PREDICTED: similar to CG13605 CG13605-PA [Tribolium castaneum] (2e-76) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005515 protein binding |
| InterPro families | IPR017907 Zinc finger, RING-type, conserved site IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001841 Zinc finger, RING-type IPR018957 Zinc finger, C3HC4 RING-type |
| Orthology group | MCL12068 |
Nucleotide sequence:
ATGGCTCAGCCGAGTCAAGTAACTCTTAATATAGAGGATGAGAACCCTGATTCAGTAGAA
AATAGTAATCTTAATAATGCACTCCATAGAACGGACCCTCCATCCAGACCAATGGTCGCA
AATAGAAGTAATTTAGGCCTCGGAGACAGACTTAATAGTGTTTTCAGGGAAATAAGACCG
TTAGTAGAACATGCAAGAATGGGCAACAATTCAAGACTTTCTCTACCAACGTGGTTACCG
AGGAATTCACTGGGCATCCACCAATCCGGGGAGGTGACGCAAAGACCACAGAGTTCTATA
GCCCATGTAAATCTTGGCTCTACGGCTCAAACATACATTGTAACAGATAGAGGACTTCCC
ATGTCACCGAGACATCAGAATCACGGGATGAGCAACAGTGCTTCAAATGATTCAAATGTA
TCAGAAAGAGCACAGGATCAGGTAGACATAAATGTATCGGTGAATCCCTCAAACAATAAT
AATATTAATGACAATGCAGATAACGATAGTCAGAGTGAAGACGGAACCCAGCAGGTAGTT
GATGTTAGAGCCACTTTGAACCTGTTGTTGCGTTATGCTCCGTTCTATATAATTCTATAC
ATTAAATACATGTACGACAGTCGTGAGGGTATATTCACATTTGTGGTATTATTATGCACA
TTCTCACACGGAAATGGCTTGGTTAAGAGAGAAAATGGGAAGCAGATGAATAGGAGCTTA
CTAGCATTATTTAGTGAATTTGTATTTGCTACGAGTTCTATACTAATCGTCCACTTCCTG
TGCGGTCATGGGAAGCTATTGGAAAATGTGGTGATGTTTCCTGTTTATACGGAGCCGATC
ACAGTTTGGGAACTGCTATGGCTTGTCATATTAACGGATCTCATTGTTAAGATTATAACG
GTCAACATAAAGATCGTGATCACAATGTTGCCAGCTTTCATATTACCGTTCCAGAAGAGG
GGTAAAGTGTATTTGTTCACGGAGGTGGTGTCTCAACTGTACCGCTCCATAATAACCATC
CAGCCGTGGATCTTCTACCTGATGCAGTCCTACGAGGGCTCCGAGCGTATGGTGGGGATG
TTCCTCACAGCGCTGTACGTCATCTCCAAGGTTGTGGAGTTACTGCTGAGGCTGAGGCTG
GTGAAAAATGCCACTTGGACCTTGCTGCAGAGCGTCAGTCTGGGCACGAAGCCAACTTGC
GAGCAGATGGTTGCCGCTGGTGATTCCTGTCCAATCTGCCACGACGACTACACCACACCA
GTCAGGTTGACCTGCAGCCATATCTTCTGCGAGCTTTGCATCTCCGCGTGGTTGGATCGC
GAGCACACTTGCCCGCTGTGCCGTGCCAAGGTCGCCGACGAACCGACTTGGAGAGACGGT
TCAACCACATACGATTTCCAACTCTGTTAA
Protein sequence:
MAQPSQVTLNIEDENPDSVENSNLNNALHRTDPPSRPMVANRSNLGLGDRLNSVFREIRP
LVEHARMGNNSRLSLPTWLPRNSLGIHQSGEVTQRPQSSIAHVNLGSTAQTYIVTDRGLP
MSPRHQNHGMSNSASNDSNVSERAQDQVDINVSVNPSNNNNINDNADNDSQSEDGTQQVV
DVRATLNLLLRYAPFYIILYIKYMYDSREGIFTFVVLLCTFSHGNGLVKRENGKQMNRSL
LALFSEFVFATSSILIVHFLCGHGKLLENVVMFPVYTEPITVWELLWLVILTDLIVKIIT
VNIKIVITMLPAFILPFQKRGKVYLFTEVVSQLYRSIITIQPWIFYLMQSYEGSERMVGM
FLTALYVISKVVELLLRLRLVKNATWTLLQSVSLGTKPTCEQMVAAGDSCPICHDDYTTP
VRLTCSHIFCELCISAWLDREHTCPLCRAKVADEPTWRDGSTTYDFQLC