| New model in OGS2.0 | DPOGS214055 |
|---|---|
| Genomic Position | scaffold421:- 68016-70130 |
| See gene structure | |
| CDS Length | 1344 |
| Paired RNAseq reads | 499 |
| Single RNAseq reads | 1354 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010388 (0.0) |
| Best Drosophila hit | CG7275 (1e-168) |
| Best Human hit | DDB1- and CUL4-associated factor 13 (1e-149) |
| Best NR hit (blastp) | PREDICTED: similar to GA20229-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to GA20229-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR019775 WD40 repeat, conserved site IPR015943 WD40/YVTN repeat-like-containing domain IPR001680 WD40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR007287 Sof1-like protein IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL13348 |
Nucleotide sequence:
ATGTCCAACTTGAAAATAAAAGTAATAAGTCGTAACCCAGAAGATTATCTGCGTTCCACT
AAAAGAGATATTCATAAAATTCCTAGGAATTATGACCCGAGTCTGCATCCCCTTGAGGGT
CCACGGGAGTATGTCAGAGCATTAAATGCGGTAAAACTAGAAAGAGTATTTGCGAAGCCT
TTTCTTGGCAGTCTTGATGGACACTCGGATGGTGTATCTAGTTTGGGAAAGCATCCTAGC
CGATTATCCGCTTTGGCTAGCGGAGCTTTTGATGGAGAAATTAGGATATGGGACTTAACT
AGTCGTAAATGTACCAGAAATTTCATTGCACATGAAGGTTGGGTTCGTGCTATTTGCTAC
ACACCAAACGGTCAACAGTTTATGAGTGTTGGTGATGATAAAACAATTAAAACCTGGAAA
GCTGATATTCAAGACCCTGATGACGAAGATCCTGTTAATACACTTCTCAGCATGTCAGTG
GTATCTGGTATTAGCCATCATAGAGCAAAACCAATATTTGCTACTTGCGGTGAACATTGT
CAGTTGTGGGAAAATACTAGGAGTGAACCTGTCAAAGTATTTCAATGGGGAGTAGATAGC
CTGCATCATGTTGCATTTAATCAGGTAGAAACAAATCTGTTAGCAGCATGTGCGAGTGAT
AGGAGCGTTATACTTTATGACTTCCGTGAGTCAGGACCTCTTAGGAAAGTAGTGATGGAA
CTGAGATCTAATGCACTATCTTGGAATCCCATGGAGGCATATATATTTACTGTAGCTAAT
GAAGACTATAACCTGTACACATTTGATATCAGAAAACTGAGACAACCAGTGAATGTTCAT
GTTGACCACACATCTGCGGTGATCGATGTGGATTATGCACCGACTGGGAGAGAATTTGTC
GCTGGTAGCTATGATAAGACTGTTAGGATATTCGAGAGCCTTAAAGGACACTCCAGAGAT
GTGTATCATACGAAGAGAATGCAGAGATTGACATGTGTTAAGTGGACATTGGATAATAAA
TATATTTTGACTGGATCAGATGAAATGAATATAAGAATGTGGAAGGCTAGAGCTTCGGAG
AAACTTGGTGTTCTCAAACCTCGAGAACGTACAGCTCTTAATTATTCGGAAGCTTTGAAG
GAGAAATTCAGTGGTCATCCACAGATCAAACGTATAGCTCGTCACAGGCACGTGCCGAAA
CACATATTGAACGCTCAGAAAGAACTTCGTACTATCAAAGAGAAGAGCAAACGTAAAGAG
GGCAACAAGCGCTCCCACAGCAAACCTGGAGCTGTGCCATTTGTACCTGAACGTAAAAAG
CATGTCGTTAAAGAAGATGAGTGA
Protein sequence:
MSNLKIKVISRNPEDYLRSTKRDIHKIPRNYDPSLHPLEGPREYVRALNAVKLERVFAKP
FLGSLDGHSDGVSSLGKHPSRLSALASGAFDGEIRIWDLTSRKCTRNFIAHEGWVRAICY
TPNGQQFMSVGDDKTIKTWKADIQDPDDEDPVNTLLSMSVVSGISHHRAKPIFATCGEHC
QLWENTRSEPVKVFQWGVDSLHHVAFNQVETNLLAACASDRSVILYDFRESGPLRKVVME
LRSNALSWNPMEAYIFTVANEDYNLYTFDIRKLRQPVNVHVDHTSAVIDVDYAPTGREFV
AGSYDKTVRIFESLKGHSRDVYHTKRMQRLTCVKWTLDNKYILTGSDEMNIRMWKARASE
KLGVLKPRERTALNYSEALKEKFSGHPQIKRIARHRHVPKHILNAQKELRTIKEKSKRKE
GNKRSHSKPGAVPFVPERKKHVVKEDE