| New model in OGS2.0 | DPOGS209267 |
|---|---|
| Genomic Position | scaffold610:+ 70834-73331 |
| See gene structure | |
| CDS Length | 909 |
| Paired RNAseq reads | 236 |
| Single RNAseq reads | 601 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007047 (3e-100) |
| Best Drosophila hit | CG12068 (2e-53) |
| Best Human hit | D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor (7e-23) |
| Best NR hit (blastp) | short-chain dehydrogenase/reductase [Bombyx mori] (6e-104) |
| Best NR hit (blastx) | short-chain dehydrogenase/reductase [Bombyx mori] (4e-99) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0005759 mitochondrial matrix GO:0005739 mitochondrion GO:0005743 mitochondrial inner membrane GO:0003858 3-hydroxybutyrate dehydrogenase activity GO:0055114 oxidation reduction GO:0005488 binding |
| InterPro families | IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR016040 NAD(P)-binding domain |
| Orthology group | MCL16027 |
Nucleotide sequence:
ATGTCGTGGACTAAGGTGGTAGCGATAACTGGTTGCGATAGTGGCCTGGGTTGGAGTATA
GCTGCGCGTTCAGCGCGAGAGGGTTTCATTACTGTGGCTGGCATGTATAACGGCATTAAC
ACAGAAGCAGCTAAGTCTCTGAACCGTCTTCGCGCTCATCCCCACAAGCTGGATATCACC
GACGCCAGTAGTGTACTAAGTTTTTACGATTATGTCAAGAAAATTTTGCATAATAACAAT
AACTATGAATTATACGCAATTGTTAACAACGCGGGAGTTATGACTATTGGAGATTATGAG
TGGCAAACACCAAAAATTATAGAAGATACAATTAACATCAACTTACTTGGAACTATGAAA
TTCACTTCAGCTTTCTTGCCAGATTTACGCAGGAACGCATTAAAGAATAAAAACAACCCT
CGTATAATCAACGTAGCAAGTCATTGTGGCCTTCAACCATTACCTGGTTTCGGGCCGTAC
AGCGCAAGTAAAGCTGGTTTACTCGCCTGGAGTAAAGCGTTACGTCTTGAACACATGAAC
ATGGGGTTAAAAGTTGTTTCATTCATACCAGGTGGTTTCGTTGGTGCCAGTAATCTTATG
ACGAATCAGTATTCAAACGCAAATGCTATGGTGGAACATCTGACCGAAGAACAAAAATCG
CTTTACGAAACAAAAATTCGTAGATTAAATGATTATTTAAAACTTGCTTCGAATAATTCA
AGATTTGATTCCTTAAAAGATGAAAATATAATTGAAACATTTATGATGGCCCTCACTGAT
GAAAATCCTAAGACAATGTACAAAGTTGAATCGTGGCGTTACAAACTTTATTATAATTTG
TTTAAGTTTCCTCTGCCGGATAAATCTTACAGGTGGTTGATTAATAAATTTCTGGACTTC
CCAAAATAA
Protein sequence:
MSWTKVVAITGCDSGLGWSIAARSAREGFITVAGMYNGINTEAAKSLNRLRAHPHKLDIT
DASSVLSFYDYVKKILHNNNNYELYAIVNNAGVMTIGDYEWQTPKIIEDTININLLGTMK
FTSAFLPDLRRNALKNKNNPRIINVASHCGLQPLPGFGPYSASKAGLLAWSKALRLEHMN
MGLKVVSFIPGGFVGASNLMTNQYSNANAMVEHLTEEQKSLYETKIRRLNDYLKLASNNS
RFDSLKDENIIETFMMALTDENPKTMYKVESWRYKLYYNLFKFPLPDKSYRWLINKFLDF
PK