New model in OGS2.0 | DPOGS209269  |
---|---|
Genomic Position | scaffold610:+ 81038-91703 |
See gene structure | |
CDS Length | 4722 |
Paired RNAseq reads   | 1370 |
Single RNAseq reads   | 4107 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007049 (4e-08) |
Best Drosophila hit   | Nup214 (9e-59) |
Best Human hit | nuclear pore complex protein Nup214 (1e-45) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC014339 [Tribolium castaneum] (1e-83) |
Best NR hit (blastx)   | nuclear pore complex protein nup214 [Culex quinquefasciatus] (2e-60) |
GeneOntology terms    | GO:0005643 nuclear pore GO:0005515 protein binding GO:0000059 protein import into nucleus, docking GO:0005875 microtubule associated complex |
InterPro families   | IPR015943 WD40/YVTN repeat-like-containing domain |
Orthology group | MCL22719 |
Nucleotide sequence:
ATGGAAATCCAATTTGGCCCGAATTCCGTTGAAGAGCCGAATCTTCTTTATAAACTCCAA
CGCAAATTTAAAGTTTTTAACACAACTAATCCTTTGCCAAATCGAGGTTACAACTTGATA
GCAAGCAGTAGCAAATATGGCTTAGTTTTCATAACTACCCCTGAAGGCATGCTATGTGTG
TACTACCTCAAACAATTAATTGACAAAGAGTGTGAGCCTCAGCATTTAGTTATTCCATTA
CCAATTCATCCAACACACATAGCTGTGAATTGCAATCAAGAGTGGCTTGCTATAATCAGT
GGACCACTTCTACTGGTTTATAAATGTTTGGGCTTCCAAAATCAGGATATAAGACCTACA
GTTACAATGCAACTTGAAGTAGCTCCTTCCACTCTTGTGTCATCATTACAATGGAATCCT
TGCATAGCAGATACAATTGGCATTGTTTTTGTTGATGGTACTCTACTTGTGAGTCAGGTC
AGCACTATGCAAGTAAAAAAGATACAAGCTGATGCTAGATGCCTCTGCTGGAGTCCTAAA
GGTAAACAGCTAGTGACTGGCAACAGTAACGGGACTTTAAAGCAATATAAACCAGATTTG
ACACTGATGAAAACATTTCCGGCACCAAATCTTTTTGAAAATTTTAGTCCAGAAGTATTG
GCAATTCACTGGATTGCCACATTTCAGTTTGTGGTAACCTATAGGAATGCTTCAGACAAT
AGTCGACCAGCGGTGGCGCTAGTCAACATTATAAAAGGTGGAACTCCAACTTGCTTCAAC
TATGAGGATATTTGTTATAGCATAGGATCTAACAGACCCTGGTATTACTACTTACTTGGA
CTAGCTCAATGGAATATAATACTTGCTGCGTCATCAAATAGTATGGAAATAGCAACTCTT
GCTTCCACAGACGGAGCAAACTGGGTTCAATGGTGTCAGTTGGATGAAGCGAGACCAGAG
TTACCTCTGACTGATAAAAACCAAGAAAACTACCCAGTTGGTATTTGTATTGATACAGCC
GCAGTACATCAACTTCCTTGGGGTGAAAATGAAGTTCTCCCACCGATGCCTCTCCTCCAT
GTGTTGTCTCAGACAGGACTACTGTCTATATTTAACATTATTAATCTAAACAAGCAAAGC
CCTCAAGTTTGCACGCCTATACAAGCATTGGAGCTTCCAGTGCAAGCCTTAACCAGGGAT
GTACCTGGACAAGTTCCTCAACCTGCTGCTAGTGAAGCTGTTCCTGTTCAACAGCCAAAG
CCAGTGCCACAACCAGTGAAAACATTGCAGCCACAACCGGTGCAACAACAACCACAACCA
GTTCAGCCACAACCGCAGCAAACTGCGGTATTACAGCAGGCAACAAAACCAGTACAACCG
CAACCAATGCAACCTATGCAGCAACAAATAATAACACCTAAGCCACAGATTCCACAATCA
GCATCAATGCCAGTGGCTAATGTTTCTTTTGGTGCGAAAAAGGAAGCAACTGCAACTGTA
TCCGAATCACAGAGTTCAGAGCAAACCCAAAAACAATCCCAAATTCAAGTACCAAAAGCA
CAGACAACATCACCAGCTGTGAATGCTGCTCTCAAACAAGAAGAGGAAAGAATTAACAAA
GCGAAAGCGGAACAAGAATTGAAGAATATGTTGTTGAAAGAAATTAATGATTTCCAAATG
GAATTGTATAAGTTTATGAAGAGCACTTGGGAGAAACAGGAGAAGTTTGAAAGAGAACTC
CAATCTGTAGACCTGAATCTCAATATAGACATGGATCCTGAAACACTAAAAAAAGAATGT
GAAATAGAAGATCTATGTGAGACTATCACACAACTGAAGTTGGATTTGGTTAGAGCTTGT
GCTGTTGTTGCTGAGTCTAGAGCACATGCCGAAGCAAATGAGCAAAGAGATTGGAGACAA
GCGGACCCGCTAACAACAAAGAGACTTTCATCTATCAAAAAAATGGTTTATTATGTGCAA
AATCAACTTGATCAAGCAAGAAAAGCGCTGGAGCTTAAATGGAACGACGTCTCCTTAAGA
GATCAGCACAGCAAACCAGGAGAGCGCATGATTCGTCCCATACTAGACGATGTCTACCAA
CCACTGGTGAAACAACAGGAGATACTGTGTAGACAACAGGCTGTACTGAAAACATTAAAA
AATACATTAAATGAATGTAACCAGACGCCAGTTGTTAAGTCTAAGTCACTCTTAAGAAGC
ACTCCATTCCGAAATAAAGATCCACTCTCTAAACTGACTAAAAACATATTAAATATGAGC
ATTGAACCAAATAACAAAACAGACGAACAACCGCTTGGTGCACAAAAACTGGACGCTTTG
AGAGATCTCCTATCAAACCACAAACCAATCAAAATAAAACCAGTCAACGTTGAACTGCGT
CAACATTTGGAAACATTGAGAAAAAGATACGAGAAAAGTTTAAAGGAAAAGAGTCAAGTT
AAAAAGACGGATGATATTGAAAAAAATGAAATTAAAAAAGATATAGCAGTGCCACAACCA
AAAATCGGTGAAAGTGTTATCCAAACAAGTAAGCCACCGGTTCACGTGGAACCGAAACCA
GTGTTCGGTCATAATTTATTCATGCAGAACGCAGCACAAGGCATCGATTGTAAGAAAGAA
TCCAACTTGCCTTTCAAAGAAAAATTTGGAGGAAGCACATTTTCTTTCACACAGACAAAA
CCAGAAGCACCGAAACCGGATGTAGTGAAAGAATCTCCCATTTCAATTCCAACATTCACT
CCTTCAAACATGAAACCAAAGCCGACGGTGCAGAGTGTTGCTAGGACTTTATTCACAGAC
GAACCAAAAGAAGAAAAACAAGTAACTGGTCAGCCGAGTCAAGTGATCAAACCCGATCAG
CAAGCAAATGCGAGTCAATACACAAAAACCCTGTTAAGGAAGATGATATTAAAAGAGTCT
GAAACAGAAAATGCTCAAGAACAGAAAGCGGTTGAGCAAAAAAATGACGCTAATACTTTC
ATGGGACAGAACATTTGCTCTCCAACCGCTTTTACTTTCTCAAAACCATCATCTACAGCG
CCACCTACCGTTTTCTCTAAACCGATCGCTGATATGACGAGCATGTTCAACAAACTGGAA
CAAACCGTACCGAAACAATCTGAAGAAACCGGTGAACCGGAAACGAGGTCGCCTAAACCT
AAAGAGGATAAACCGATGACTAACATATTCAGCATGAAACCATTGAGCAACAAGAACCAT
AATGTACCTGACCTAGTCAAGAGCCCTGGTTTTGGTAAGGACGATACCAAAGTGGAGGAA
AAATCCAAAGAAAATTCTGCACAGAAACCTGTTGAAAGCAAAAATGAGTTGAAACCAGCA
GTGGCTCCAATGATCAGCAAGCCGCCAGCGCAATCTGTCATAGTCGTTGATCTTAAAAAA
CCAGCTGCTGAAACGAAAGTTGAAAAATTTACGCCGGCCATATTCAAAACAGACGAAGCG
ACTGCCTCTCGGCCTGAAATCACTGCAAAAGCTGAACCGATACCTACAGCAGTTGCCGAA
GACTCAAAACCACGATCTCCTGCCGCCTCCGAAGCCAAACCTGTTGTTGGAATTGAACCT
AAGACTAAAAATAAAGAAGCAGATTCCGAAAAACCATCAGATTTAACCGTAACTAAATCT
GATACTGCCACAGTGTCTACTCCTGTGATTATTTCGTCCATATTTTCTTCACCGCCCAAC
GTCACTGTTACTTCTTCGGTCGTGTCAAGTACCTCTACATCAATATTCAATACAACGACC
ACACAATCTACTTTCGGAAATAAGCCCTCCGCATTCGCTCCAAACACAGCTTCCTCAGTA
TTCGGGTCTGCTTCAGCATCTGTTTTCGGAACTCAAGCGCCCTCTTTTGGAACTGCAAAT
GTATTTGGCACTACTGCTACTCCAACTTCTACAACGCAAAGCATCTTCGGGGCCTCTACT
ACAACCACTTCGAGTATATTCGGTACTACAACTACCACACAGAGTCTATTCGGCGGGACA
TCGTCCGCACAAAGCATATTTAGCGCTGCTGCTTCTAAATCTTTATTCGGAACAACCCAA
CCGAATACTAACATCTTCGGTGCAACAACACAAACAACCGTATTCGGTTCAAAGCCGTCT
GTTTTTTCATCTACCAGTTTCGGGTCCTCAACCCAGGCGTCTATATTCGGCGCTCCCACA
TCACAGCCGTCGGTATTCAGTACTCCTGCTACAACACAAACTTCAGTTTTCGGCACACCA
ACAACAACTCAAACTTCTGTATTCGGCTCGCCTTCAACAACCCAGTCGTCTATTTTTGGT
ACACCCACAACACAAGCTTCGGTATTTGGTTCACCCACAACAACACAGACTTCGGTTTTC
GGTACACCTACAACTCAAACATCAGTGTTCGGTAGTTCCAATGCATCCCAAACCTCAGTA
TTCGGGAGTCCAACAACTACCCAGAGCTCGCTATTCGGTGGCGCCGAATCTAATTTGTTT
GCGGCTGCAAGTATTTCGACTACCAGCGCTCCATCGCAGGCTAGCGGAGGAAATATCTTT
GGAAGTTCCCCGGGATCAGTATTCAGTAGCAACACTTCCAACGTGTTCGGTAAGCCAGCA
TTCGGCTCGTCTACCTTCGGACAAAAACCAGCTACAGATTTCTGGAGCGGCGGTGATAAA
ACTAACACCGGTTTTGGAACTTCCACCTTCGGTAATAATTAG
Protein sequence:
MEIQFGPNSVEEPNLLYKLQRKFKVFNTTNPLPNRGYNLIASSSKYGLVFITTPEGMLCV
YYLKQLIDKECEPQHLVIPLPIHPTHIAVNCNQEWLAIISGPLLLVYKCLGFQNQDIRPT
VTMQLEVAPSTLVSSLQWNPCIADTIGIVFVDGTLLVSQVSTMQVKKIQADARCLCWSPK
GKQLVTGNSNGTLKQYKPDLTLMKTFPAPNLFENFSPEVLAIHWIATFQFVVTYRNASDN
SRPAVALVNIIKGGTPTCFNYEDICYSIGSNRPWYYYLLGLAQWNIILAASSNSMEIATL
ASTDGANWVQWCQLDEARPELPLTDKNQENYPVGICIDTAAVHQLPWGENEVLPPMPLLH
VLSQTGLLSIFNIINLNKQSPQVCTPIQALELPVQALTRDVPGQVPQPAASEAVPVQQPK
PVPQPVKTLQPQPVQQQPQPVQPQPQQTAVLQQATKPVQPQPMQPMQQQIITPKPQIPQS
ASMPVANVSFGAKKEATATVSESQSSEQTQKQSQIQVPKAQTTSPAVNAALKQEEERINK
AKAEQELKNMLLKEINDFQMELYKFMKSTWEKQEKFERELQSVDLNLNIDMDPETLKKEC
EIEDLCETITQLKLDLVRACAVVAESRAHAEANEQRDWRQADPLTTKRLSSIKKMVYYVQ
NQLDQARKALELKWNDVSLRDQHSKPGERMIRPILDDVYQPLVKQQEILCRQQAVLKTLK
NTLNECNQTPVVKSKSLLRSTPFRNKDPLSKLTKNILNMSIEPNNKTDEQPLGAQKLDAL
RDLLSNHKPIKIKPVNVELRQHLETLRKRYEKSLKEKSQVKKTDDIEKNEIKKDIAVPQP
KIGESVIQTSKPPVHVEPKPVFGHNLFMQNAAQGIDCKKESNLPFKEKFGGSTFSFTQTK
PEAPKPDVVKESPISIPTFTPSNMKPKPTVQSVARTLFTDEPKEEKQVTGQPSQVIKPDQ
QANASQYTKTLLRKMILKESETENAQEQKAVEQKNDANTFMGQNICSPTAFTFSKPSSTA
PPTVFSKPIADMTSMFNKLEQTVPKQSEETGEPETRSPKPKEDKPMTNIFSMKPLSNKNH
NVPDLVKSPGFGKDDTKVEEKSKENSAQKPVESKNELKPAVAPMISKPPAQSVIVVDLKK
PAAETKVEKFTPAIFKTDEATASRPEITAKAEPIPTAVAEDSKPRSPAASEAKPVVGIEP
KTKNKEADSEKPSDLTVTKSDTATVSTPVIISSIFSSPPNVTVTSSVVSSTSTSIFNTTT
TQSTFGNKPSAFAPNTASSVFGSASASVFGTQAPSFGTANVFGTTATPTSTTQSIFGAST
TTTSSIFGTTTTTQSLFGGTSSAQSIFSAAASKSLFGTTQPNTNIFGATTQTTVFGSKPS
VFSSTSFGSSTQASIFGAPTSQPSVFSTPATTQTSVFGTPTTTQTSVFGSPSTTQSSIFG
TPTTQASVFGSPTTTQTSVFGTPTTQTSVFGSSNASQTSVFGSPTTTQSSLFGGAESNLF
AAASISTTSAPSQASGGNIFGSSPGSVFSSNTSNVFGKPAFGSSTFGQKPATDFWSGGDK
TNTGFGTSTFGNN