| Genomic Position | scaffold200:- 6151-16535 |
|---|---|
| See gene structure | |
| CDS Length | 4296 |
| Paired RNAseq reads | 3274 |
| Single RNAseq reads | 7051 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006465 (4e-12) |
| Best Drosophila hit | verthandi (5e-76) |
| Best Human hit | double-strand-break repair protein rad21 homolog (1e-67) |
| Best NR hit (blastp) | PREDICTED: similar to Rad21 CG17436-PA [Tribolium castaneum] (2e-150) |
| Best NR hit (blastx) | PREDICTED: similar to Rad21 CG17436-PA [Tribolium castaneum] (4e-136) |
| GeneOntology terms | GO:0006289 nucleotide-excision repair GO:0008278 cohesin complex GO:0007064 mitotic sister chromatid cohesion GO:0000775 chromosome, centromeric region GO:0007067 mitosis GO:0000228 nuclear chromosome GO:0005721 centromeric heterochromatin GO:0043222 SMC/kleisin ring complex GO:0007052 mitotic spindle organization GO:0005705 polytene chromosome interband GO:0016322 neuron remodeling GO:0005634 nucleus GO:0010628 positive regulation of gene expression |
| InterPro families | IPR023093 Rad21/Rec8-like protein, C-terminal IPR006910 Rad21/Rec8-like protein, N-terminal IPR006909 Rad21/Rec8-like protein, C-terminal, eukaryotic |
| Orthology group | MCL15734 |
Nucleotide sequence:
ATGTTTTACGCACATTTTGTGCTGGCCAAAAAAGGCCCATTGGCCAAAATTTGGTTGGCG
GCTCACTGGGATAAGAAATTAACTAAAGCTCATGTATTCGAGACGAATATTGAGAAGTCG
GTGGACGGCATTTTGAAGCCAAAAGTTAAAATGGCATTGCGTACATCTGGCCATTTATTA
TTGGGTGTGGTGAGAATCTACTCTAGGAAAGCCAAGTACCTACTGCAGGACTGTAATGAA
GCCTTCGTTAAGATCAAGATGGCCTTTAGGCCGGGAATGGTGGACTTGCCCGAAGAACAC
AGAGAGGCAGCCATGAATGCAATTACATTGCCTGAAGTCTTCCACGACTTTGACACCGCT
ATGCCCGAGTTAAATGAGGTTGACATTGAGGCCCAGTTTTCTCTAAATCAATCAAGAGCT
GAAGAGATTACTATGAGAGAGGATTATGGTTCATTGAACCTTGTTACTCATGATGATGGA
TTCGGTGATATGGGTTTTGATACTGACAACCCTGATATTATGAGAGAAGCTATCGGCAAT
GAAGGGGGCTTAGAACAGAGTAATCTACTGTTTGCGGATGGTTCATCTTTAGAGTTGGGT
GGAAAAGACGCAAGTAATAATGCAGGGGTGCCAACATTAGCACCAGCGTCTCACGAGCCG
CGTATGGAGGCTGCACCAAACGGACCCATGGATGATGGTTTTGGTGGCACTATTGGAGAT
GTGGGAGATTTTGGACATGCTGGTGGATTGTTTGAAGGGGATTTGTTTGGTGATGTAACG
GCCGGTAGCTCTGCCGGTGGTGCAAACGCTGGTCTACCTGGCACATCTGCACAACCACAG
TCATTGCAGGCGGAGATAGAAGCTGCGGGGGGCGTGGGCTCGGAGGCAGCGGATTCGGAT
GACGATATGCATTATGATGCACCACCATCACCACACTCCACCGGCGACGAACATGGAGAC
GATAGGAGGTCACCACAACACGAACAGCACGGATGGACGTCTCCCCGCGAGGAGGCGAGA
GGTGATGACGCACTGATGCCGCCACCAGCGGCGCCGAGACCGAGTTCCGTCCGCCCAATG
GAGGTGGATCAAGAGGTCCCCGCAGAGGAGACTCCAAACGAGGAAGCCGTCCCTCCCGCG
CCGGCCGCAGAGTCTTCAGCTCAGCAACAGAATGATGAAGAATCGTTTGCCTTAGCGCCT
GTAGACGCCACTGTGGTTAAAGGTGCTACTAAAACGAAACGCAAGCGCAAGCTCATTGTA
GACGACACTAAAAACATATCAGGGGAAGAAATGAAGAATCAATTGAGTAACACGTCAGAT
ATCCTTATAACCTTGGACTTGGCTCCGCCCACCAGAAGACTGATGCATTGGAAGGAATCC
GGAGGAGTAGAGAAACTGTTCACTCTCCCCGCCATCCCTATACCCTCCAGAGTGCTTTTT
AAGAAGTACCAGCAGTATCTAGCACAACGTATGGAACCCGAGCCTGAAGAGGCGGTGCGT
TCACCTGACCCCGAGCCGCCTGTCGCGAGAAGGGCCGGGCGGAAGCGGAGACATGACGAT
GTACTGAGTATTCATCCACCCGAAACGCCGGCGCCTCCTCCGCAAGCAGAATTGGAACCT
CCGACTCCGATACCCCAAGAGTATGAACCATCTATTGAGGAAAGAGATCGTACGCCGCCG
CAGTCGCCCAGACACGAGACAGACATCGAAGCACCCGGCACGCCAGGTATGCTGTCTTCT
TTGGGTGCCCCTCTAACCCCAGGCGGCCTGGGTCCTTTGACTCCGGGTACATTACTTCAG
GGTGGCATCACGCCTGGCAGTCTACCACACGGCGCTATGACACCAGGCGGTTTGACTCCC
GCGGGACTGCACCATGGAGATCAACCGGATCTTGGTTTGCATTCTGGTATGATGTCTGGT
GGAATGACTCCAGGCGGTATGACCCCTGGCTTAGGATTAGATGGTGGTATGACTCCGGCT
GGGTTACACCATGCTTCAATGACACCAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAGGTACATTT
ATAGTCAAGGAGATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGAT
TTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTAAGTACATTTATAGGCAAGGAG
ATACATGAGGATTTAGGTACATTTATAGTCAAGGAGATACATGAGGATTTATGTACATTT
ATAGTCAAGGAGATACATGAGGATTTATATGTGGCGCAAAAATTCTACAGTTTACTAGTG
CTCAAGAAGCATCAAGTGCTAAAATTAGAACAAAACGAAACATACGGGCCTATCACAGTA
ACGAAAGGCCCGCAGTTCGAAACGGATGCTATATAA
Protein sequence:
MFYAHFVLAKKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL
LGVVRIYSRKAKYLLQDCNEAFVKIKMAFRPGMVDLPEEHREAAMNAITLPEVFHDFDTA
MPELNEVDIEAQFSLNQSRAEEITMREDYGSLNLVTHDDGFGDMGFDTDNPDIMREAIGN
EGGLEQSNLLFADGSSLELGGKDASNNAGVPTLAPASHEPRMEAAPNGPMDDGFGGTIGD
VGDFGHAGGLFEGDLFGDVTAGSSAGGANAGLPGTSAQPQSLQAEIEAAGGVGSEAADSD
DDMHYDAPPSPHSTGDEHGDDRRSPQHEQHGWTSPREEARGDDALMPPPAAPRPSSVRPM
EVDQEVPAEETPNEEAVPPAPAAESSAQQQNDEESFALAPVDATVVKGATKTKRKRKLIV
DDTKNISGEEMKNQLSNTSDILITLDLAPPTRRLMHWKESGGVEKLFTLPAIPIPSRVLF
KKYQQYLAQRMEPEPEEAVRSPDPEPPVARRAGRKRRHDDVLSIHPPETPAPPPQAELEP
PTPIPQEYEPSIEERDRTPPQSPRHETDIEAPGTPGMLSSLGAPLTPGGLGPLTPGTLLQ
GGITPGSLPHGAMTPGGLTPAGLHHGDQPDLGLHSGMMSGGMTPGGMTPGLGLDGGMTPA
GLHHASMTPGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLGTF
IVKEIHEDLGTFIVKEIHEDLGTFIVKEIHEDLSTFIGKEIHEDLGTFIVKEIHEDLCTF
IVKEIHEDLYVAQKFYSLLVLKKHQVLKLEQNETYGPITVTKGPQFETDAI