| New model in OGS2.0 | DPOGS213316 |
|---|---|
| Genomic Position | scaffold714:+ 25369-36943 |
| See gene structure | |
| CDS Length | 2688 |
| Paired RNAseq reads | 2445 |
| Single RNAseq reads | 5795 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010860 (2e-07) |
| Best Drosophila hit | lilliputian, isoform D (8e-09) |
| Best Human hit | AF4/FMR2 family member 3 isoform 2 (3e-08) |
| Best NR hit (blastp) | PREDICTED: similar to lilliputian CG8817-PB, isoform B [Apis mellifera] (2e-45) |
| Best NR hit (blastx) | PREDICTED: similar to lilliputian CG8817-PB, isoform B [Apis mellifera] (6e-24) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0007366 periodic partitioning by pair rule gene GO:0008361 regulation of cell size GO:0032368 regulation of lipid transport GO:0042051 compound eye photoreceptor development GO:0045449 regulation of transcription GO:0051493 regulation of cytoskeleton organization |
| InterPro families | IPR007797 Transcription factor AF4/FMR2 |
| Orthology group | MCL21992 |
Nucleotide sequence:
ATGTTGGGATTCCTTACAACCGGCGGCTTTGGATACCAGAACCGGCTGACATTGCTTCAG
CAGCTGATAGAATGTGGTGATGTTCTACTCGGAAGGGAATTCGTTCGTGGTTTGGACAAT
CGGATATCAAACTCAAGGAGTTCAGTATCGCCTGACGTGGTGAACAAAGATCTCGGTCTG
TCAGAGAGCGATGATGAAGTAGCCGCAACCACCACAAGGCTTGAACCCATCCTCTCTCCT
ATCGGTTCCGGTGGTTCTCCGAGTTCTGGGAGTTCGTCTCCATCAGATTCTGAATCGGAG
TCATCATCAGCGGAGTCCAGCCCGGCGGTGCCTCCGCCCGCACCCGTCCCAGCACCACAG
AGGTCTTCTTGGAGCCTGTCGAACTTCGCCCCACCACCGCCACCCGACCACGCGGATCTA
AGTAATGTTTTGGCCGACGCTAAAGGGAAACCGAAATGGATAGATTTGGCTGTGTTGAAA
TGTAATCTAAGGAAAGGTCTTGGGAGTTTTGAAAACAATCTCGAAGACATTCCATCGACC
GATAAGAATAAAGTATTGAGTGCTTATTTCAAATTAAAAGATATATTATGGAAAGCAGTC
GGAGCGTTGCACGGGAACATCACGGATATAGCCCAATTTACACCAAGACCTAACCCGGTT
CGAACCCAAACCTCGCCCACCATAGCTCAGAACACGGGTGTGAAACGCGGCAGGCCCCCC
AAAGCCCGGACTTCGGAAGAAAGGCCGGCAAAGAAAAAGCGTGGCAGACCTCCGAAAACG
AGGCCCCCATCACCGGCCCCGGACAGTGAGGCTGAGGCTGACCCCCCGCAACACCTCCAG
GAAACCAAGACCCATATATTCCGCAAGGTTTTCACGCCCAAGAAGACGGACGATGGATGT
GGTGGAAAAGGTGGGAAAGGAGGAAAAGGGAAAGGGAGTAAGGGAAAGAGTCAGGTGACC
ATCATAGAGGTGACGGCTCCTGAACTAGGTACTGGCGGTGAAGATAGGAGACACAGTGAG
AGATCAGCGGAACGGAGGAACGAAGAGGCGATCGCCAGAGTATCACCGCCACGGGAACCG
GAAACACTCACACGGAAACGGGAAGCGGATAGAATGGCCAACGAGAGGATACAGGAAAGA
GTCTCTATAGAAAGGCACGACCGAATACAAGAGAGACCAGACAGAACCCCCATCGACCGA
ATACTGGACAGAACCGAGCGGATACCGGAGAGACGGTCCAGTGACCGATTACCACCCGAC
AGAATATCCAACGATCGGATATCTTCAGATCGATTGTCGGATCGATCGTCCCTTAACAAC
TCGGAAAGGAAATCAACAGATCGGTTATCGACTGACAAAATGTTGATCGATCGGATACAC
GGCGACCGGATTTCGGTCGACAAAATGTCTCACGACCGGCTATCCGGTGATAAACTCTCT
CACGATAGGTTGTCGGGCGACAAGTTGTCGCACGACCGACTATCGAACGACAAGATGTCG
CATGACAAATTATCAATAGACCGGTTATCAGGGGATAAGTTACCTTTAGATAGAGTCGAA
AGGGTCGCACCAGATCGCTATATAAGGGCGGAGGCTGACGTCGGTTTCGTACAAAACTCA
TTACCGAACGGTTCAGAGCGTCGTCGTTCGCGGTCGTCTCGTCTAACAGTGTCCATACCT
CTGGCAAGATTGAGAGTTGAAACACTCCGAGTATTACAACGACCGCAAAGAAATGCCCCA
GCGCCCACGCCGCCGACGCCGCCCACACCGCCCACGCCGCCCACTGACCACACGCTAGAG
GGCGGTAGTAGCGGCGTTGAACGCGCTGGTCGTACTCCTATATACTATTCATACTTTGAA
AGACTACCAGCCGACGCCCTGTCTGACGAGGAAAGGGACCATAAATATTACCTCGGCGAA
GCCAAACGTCTGCGCACAGAGGCCGAGAGGGAACAAGAGCCCCTCGCGCGAGTGATGCTG
TATTTAGAATCAGTGCTGTGCTTCGTCCTGACCGGTCGAGTGCTGGAACTAGAACTCGAT
ACTAAACGAGCCTTCACTATATATCGAGAGACTATCGAATACATTAAATCGATACACTCG
ATGCCGCAGCGGTTCAGAGCCTCCCCACATTCAACTTTCAGCAAGTTGGATATCTTGAGT
TTGCGGGTACAAGCGTTGCTGTACTTGCGCATGTTCAAGATGTACAGTCGGGAGGTGAAG
GAATACAACAAGATTGTACAGGAGTATCAGCAGAAGCCGGCGTGTGCGGAGGCCGTGTCC
GGTGGCGCGGGTGTGACCGTATCGTCGGCGCGCTCGGCGTCCCCTCTCTCGCCGTCTCCG
TCGCCCGCGGGGTCGGTGGGCTCGGGCTCCGGCTCGGGCTCGGGCTCCGGTTCGGGCTCG
TCGGGCTACTGCTCGCTAGCCCCCGGGGCTTACTGTACACTCGCCCACGCGGTGCCCGCC
CACGCCCACCACGCTCTGCTACAACTGACCAAGTATTACACGTTCCTGTACGTAGCACAC
GACCTATGGGAACAGGCCGACTGTCTGTGTCGACTGAGACCCAATCAAGATCTATTCATC
GCCGTGGACCGTAAGTGCGGGCCGCTAACTTTGTTTTCTACGTTCCGTCATCTAGTGCAG
TACGTGAGGCACGCTATATCGCTTCTCAAGAACGCCGCCAGGGAGTGA
Protein sequence:
MLGFLTTGGFGYQNRLTLLQQLIECGDVLLGREFVRGLDNRISNSRSSVSPDVVNKDLGL
SESDDEVAATTTRLEPILSPIGSGGSPSSGSSSPSDSESESSSAESSPAVPPPAPVPAPQ
RSSWSLSNFAPPPPPDHADLSNVLADAKGKPKWIDLAVLKCNLRKGLGSFENNLEDIPST
DKNKVLSAYFKLKDILWKAVGALHGNITDIAQFTPRPNPVRTQTSPTIAQNTGVKRGRPP
KARTSEERPAKKKRGRPPKTRPPSPAPDSEAEADPPQHLQETKTHIFRKVFTPKKTDDGC
GGKGGKGGKGKGSKGKSQVTIIEVTAPELGTGGEDRRHSERSAERRNEEAIARVSPPREP
ETLTRKREADRMANERIQERVSIERHDRIQERPDRTPIDRILDRTERIPERRSSDRLPPD
RISNDRISSDRLSDRSSLNNSERKSTDRLSTDKMLIDRIHGDRISVDKMSHDRLSGDKLS
HDRLSGDKLSHDRLSNDKMSHDKLSIDRLSGDKLPLDRVERVAPDRYIRAEADVGFVQNS
LPNGSERRRSRSSRLTVSIPLARLRVETLRVLQRPQRNAPAPTPPTPPTPPTPPTDHTLE
GGSSGVERAGRTPIYYSYFERLPADALSDEERDHKYYLGEAKRLRTEAEREQEPLARVML
YLESVLCFVLTGRVLELELDTKRAFTIYRETIEYIKSIHSMPQRFRASPHSTFSKLDILS
LRVQALLYLRMFKMYSREVKEYNKIVQEYQQKPACAEAVSGGAGVTVSSARSASPLSPSP
SPAGSVGSGSGSGSGSGSGSSGYCSLAPGAYCTLAHAVPAHAHHALLQLTKYYTFLYVAH
DLWEQADCLCRLRPNQDLFIAVDRKCGPLTLFSTFRHLVQYVRHAISLLKNAARE