| New model in OGS2.0 | DPOGS209814 |
|---|---|
| Genomic Position | scaffold1862:+ 10248-12493 |
| See gene structure | |
| CDS Length | 570 |
| Paired RNAseq reads | 1317 |
| Single RNAseq reads | 3156 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008038 (5e-60) |
| Best Drosophila hit | peptidoglycan recognition protein SA (9e-38) |
| Best Human hit | peptidoglycan recognition protein 1 precursor (3e-33) |
| Best NR hit (blastp) | RecName: Full=Peptidoglycan recognition protein; Flags: Precursor (2e-67) |
| Best NR hit (blastx) | RecName: Full=Peptidoglycan recognition protein; Flags: Precursor (5e-69) |
| GeneOntology terms | GO:0042834 peptidoglycan binding |
| InterPro families | IPR015510 Peptidoglycan recognition protein IPR002502 N-acetylmuramoyl-L-alanine amidase domain IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria IPR017331 Peptidoglycan recognition protein, PGRP-S |
| Orthology group | MCL16850 |
Nucleotide sequence:
ATGGTTATGAATAGTTTCTTAATATGGACGCTTACGTGGATTTTAGTTAGTGGTGGCTGC
TTCGTAACAAAGGAAGAATGGGATGGATTGCCTCCCTTGCACGTAGACTATCTTCCCAGA
CCAGTGGACTTGGTTATCATACAGCATACAGTGACATCTACTTGTAGCACATTCGAGTCA
TGCAAAAATATCGTTCAGAGTATACAGAATACCCATATGGAAGACCTTAAGTTTTGGGAT
ATTGGAATGTCATTTTTGGTTGGCGGTGATGGCAAAGTTTACGAAGGTTCTGGTTGGCTA
CACGTTGGTGCACATACATTCGGATACAATAAAAAATCCATAGGCATATCATTCATAGGA
AACTTTAACAACGATGAACCAACACCACAGGCGATAGCTGCAGCCCAAACTCTTCTAAGA
TGTGGCGTGGAAGAAGGACATCTATCTCCATACTACCACCTAGTAGGCCATAGACAACTC
ATTGCCACGGAAAGCCCCGGACGGAAATTGTATAGAGAAATTAGAACCTGGCCCCATTAC
CTGGAAGATGTATCATCGATAAAAAATTAA
Protein sequence:
MVMNSFLIWTLTWILVSGGCFVTKEEWDGLPPLHVDYLPRPVDLVIIQHTVTSTCSTFES
CKNIVQSIQNTHMEDLKFWDIGMSFLVGGDGKVYEGSGWLHVGAHTFGYNKKSIGISFIG
NFNNDEPTPQAIAAAQTLLRCGVEEGHLSPYYHLVGHRQLIATESPGRKLYREIRTWPHY
LEDVSSIKN