New model in OGS2.0 | DPOGS210553  |
---|---|
Genomic Position | scaffold953:- 20980-23578 |
See gene structure | |
CDS Length | 1398 |
Paired RNAseq reads   | 1857 |
Single RNAseq reads   | 5706 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013447 (7e-73) |
Best Drosophila hit   | rasputin, isoform D (5e-58) |
Best Human hit | ras GTPase-activating protein-binding protein 2 isoform a (9e-43) |
Best NR hit (blastp)   | PREDICTED: similar to rasputin CG9412-PB [Tribolium castaneum] (2e-99) |
Best NR hit (blastx)   | PREDICTED: similar to rasputin CG9412-PB [Tribolium castaneum] (2e-66) |
GeneOntology terms    | GO:0017124 SH3 domain binding GO:0003729 mRNA binding GO:0016318 ommatidial rotation GO:0001752 compound eye photoreceptor fate commitment GO:0007265 Ras protein signal transduction GO:0005829 cytosol GO:0005515 protein binding GO:0003676 nucleic acid binding GO:0000166 nucleotide binding GO:0006810 transport GO:0005811 lipid particle GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
InterPro families    | IPR012677 Nucleotide-binding, alpha-beta plait IPR000504 RNA recognition motif domain IPR018222 Nuclear transport factor 2, Eukaryote IPR002075 Nuclear transport factor 2 |
Orthology group | MCL13739 |
Nucleotide sequence:
ATGGTAATGGAGGCGTCCCCGTCCCCGTCCCCGCAGAGCGTCGGCCGCGAGTTCGTCCGC
CAATACTACACTCTGCTCAACAAAGCGCCCGCACACCTGCATAGATTCTACAATAACTAC
TCGTCGTTCGTGCATGGCGGGCTGGACGCGCCCAACCGCGAGACGCTGCCTGTCGTCGGA
CAGAAGCAGATCCACAACCGTATCCAGCAGCTCAACTTCCGCGACTGTCACGCCAAGATC
AGTCAGGTGGACGCGCAGGCCACGCTGGGCAACGGAGTCGTGGTGCAGGTCACCGGCGAG
CTGTCCAACGCCGGCGCCCCCATGAGGCGCTTCACGCAGACCTTCGTGTTGGCGGCGCAG
TCGCCCAAGAAGTACTACGTGCACAACGACATCTTCCGCTACCAGGACGTGGTGTTCTCC
GACGAAGAAGGCGAAGGCTCCGGCCGCTCGGACGCCGAGGAGGAGGACGCGGCCGCCGGC
GGGTACTTCCCGCCCGCTTTTCCGCCCGCGCCCTTCCCCGCGCCGCCGCACGCCCAGCTC
GTGTCGCTGCCCGCGTCGCCGCATCTCAACGGACACCCTCACGACGACCCCGCCAGGCAC
CTCGCGGCCGCGCTGCAGGCTGACCCCTCCGCCATGTGTCCCGCGACACCGGCCGGAACC
ACCTCGACTCTGCGCCCCGTCTCCTCGGCCGGCACGATCGCACCCGCCGCAGCCGCAGTC
CCCGAGCGGGAAGAGGAACCGGCCCCGGAGCCCGAGCGTGAGCCGACGCCTCCGCCCCAG
CAGCCGACGCCTCAACCGATGCCTCAACCCGCGGCGGCCGCCCCTCCGGAACCCAAAACG
TACGCCAACCTGCTGAAGTCTGGATCGAGTGCTAGTACAACGCGTGGCTCACCCCCTGCG
CCCCCCGCACCCGTTCCCGCTCCCTCATCTGCGCCGGCGCCCGCCTCGCACGAGCCCCGC
GCACGCCCGCCCAGGAGCGCTCAGCCACAGCAGCAGGCCGGCAACCAGGACGGCGGTCGT
CGGTACTCGGACGCCCAGCAACTGTTCCTGGGCAACCTGCCGCACTCCGCCACGGAGGAG
AGTCTGCGTGCTATCTTTTCTCGGTTCGGTCCCGTGGCCGAGCTGCGCGTGCACAGCAAG
CCCGCCGCGCCCGGAGCGCCGCGCCACCCTAATTACGGCTTCATCACCTACGAGACGGCG
CAGGCCGCCGCCGACTGTCTGCTGGCCGCCGCCAACGAGCCGCTGTACTTCCCTGGCGAG
GGCGGTGAGGGCGGCGAGGGCGCCGGTGTCAAGCTCAACGTGGAGGAGAAGAAGACCCGC
GGACGCGAGCCCCCGCGCCGCCGCCCGCTGTCGTCTCACCGCGCCTCCTTCCAGCCGCGC
CAGAACTTCCGCCGCTAA
Protein sequence:
MVMEASPSPSPQSVGREFVRQYYTLLNKAPAHLHRFYNNYSSFVHGGLDAPNRETLPVVG
QKQIHNRIQQLNFRDCHAKISQVDAQATLGNGVVVQVTGELSNAGAPMRRFTQTFVLAAQ
SPKKYYVHNDIFRYQDVVFSDEEGEGSGRSDAEEEDAAAGGYFPPAFPPAPFPAPPHAQL
VSLPASPHLNGHPHDDPARHLAAALQADPSAMCPATPAGTTSTLRPVSSAGTIAPAAAAV
PEREEEPAPEPEREPTPPPQQPTPQPMPQPAAAAPPEPKTYANLLKSGSSASTTRGSPPA
PPAPVPAPSSAPAPASHEPRARPPRSAQPQQQAGNQDGGRRYSDAQQLFLGNLPHSATEE
SLRAIFSRFGPVAELRVHSKPAAPGAPRHPNYGFITYETAQAAADCLLAAANEPLYFPGE
GGEGGEGAGVKLNVEEKKTRGREPPRRRPLSSHRASFQPRQNFRR