New model in OGS2.0 | DPOGS210556  |
---|---|
Genomic Position | scaffold953:- 8823-10183 |
See gene structure | |
CDS Length | 501 |
Paired RNAseq reads   | 2931 |
Single RNAseq reads   | 7522 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013449 (1e-55) |
Best Drosophila hit   | histone H2A variant (2e-50) |
Best Human hit | histone H2A.Z (2e-50) |
Best NR hit (blastp)   | H2A histone family member V [Bombyx mori] (8e-65) |
Best NR hit (blastx)   | H2A histone family member V [Bombyx mori] (6e-52) |
GeneOntology terms    | GO:0000786 nucleosome GO:0005634 nucleus GO:0005694 chromosome GO:0003677 DNA binding GO:0006334 nucleosome assembly |
InterPro families    | IPR009072 Histone-fold IPR002119 Histone H2A IPR007125 Histone core |
Orthology group | MCL12694 |
Nucleotide sequence:
ATGGCTTGGCAGCACTTGAACGCCCGCCATTTTGTAATGTTCTTATTGGTTGTCTGCATG
TGGCGAGACTTGTTTGTTTTACGACATTTCCGTTTGCTTACGATTGGCCAACCTGCTGGT
GGTAAAGCGGGTAAAGATTCAGGCAAAGCTAAGGCTAAAGCCGTATCGAGATCAGCAAGA
GCAGGATTACAGTTTCCCGTAGGCAGAATTCATCGACATCTTAAAAATAGGACAACTAGC
CATGGTCGTGTAGGTGCAACCGCGGCTGTATATTCCGCAGCTATTCTTGAATATCTTACA
GCCGAGGTTTTGGAGTTAGCGGGAAACGCGTCCAAGGATTTAAAGGTGAAGCGTATCACA
CCTCGGCATCTGCAGCTTGCCATTCGCGGAGATGAAGAGCTGGACAGCCTTATAAAGGCT
ACCATCGCGGGCGGCGGAGTCATCCCACACATACACAAGTCGCTTATCGGCAAGAAAGGC
GGCCCCGGAGCACCCGTCTAA
Protein sequence:
MAWQHLNARHFVMFLLVVCMWRDLFVLRHFRLLTIGQPAGGKAGKDSGKAKAKAVSRSAR
AGLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRIT
PRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGGPGAPV