| New model in OGS2.0 | DPOGS216011 |
|---|---|
| Genomic Position | scaffold734:- 10898-20565 |
| See gene structure | |
| CDS Length | 1956 |
| Paired RNAseq reads | 520 |
| Single RNAseq reads | 1479 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000941 (3e-157) |
| Best Drosophila hit | Sema-2a, isoform C (0.0) |
| Best Human hit | semaphorin-6D isoform 4 precursor (6e-75) |
| Best NR hit (blastp) | semaphorin 2a [Polyrhachis vicina] (0.0) |
| Best NR hit (blastx) | semaphorin 2a [Polyrhachis vicina] (0.0) |
| GeneOntology terms | GO:0007629 flight behavior GO:0042756 drinking behavior GO:0030534 adult behavior GO:0007632 visual behavior GO:0005576 extracellular region GO:0007411 axon guidance GO:0016201 synaptic target inhibition GO:0007431 salivary gland development GO:0016020 membrane GO:0004872 receptor activity GO:0005515 protein binding |
| InterPro families | IPR015943 WD40/YVTN repeat-like-containing domain IPR007110 Immunoglobulin-like IPR001627 Semaphorin/CD100 antigen |
| Orthology group | MCL10674 |
Nucleotide sequence:
ATGAACGAAGACAGAAACACGCTTTACGTCGGTGCTATGGATCGAATATTTAAGCTTAAT
ATGTCAGATATAAGTCAATCACATTGTGAGAGAGATGCACTGCTATTAGAAGCAAGTAAC
GTAGCGCGATGTGTAAGCAAAGGCAAATCAGAGCCGTTTGAATGCAGAAACCACATCCGA
GTACTGCAGCCGCTTGGCGATGGTGAACGCTTGTACGTGTGCGGCACCAACGCACACAGT
CCAAAAGACTTCGTGGTTTATTTGAACCTGACACATCTACCGAGGCACGAATACGTGCCA
GGAGTGGGCTTGGGGGTTGCCAAGTGCCCCTACGACCCAGCAGACAATAGCACTGCGGTG
TGGGTCACGCAGGGCAATCCCGGCGGCCTGCCAGCTCTTTACGCGGGCACTAACGCCGAA
TTTACTAAAGCGGACCCGGTCATATTTAGAAATGACCTCTTTGATTTTCGAACAGGTCAA
AAGAGGTTCAACTTCAAACGGACTCTCAAGTATGACTCCAAATGGCTGGATAAAACCAAT
TTCGTGGGGTCATTTGATGTCGGTGAATACGTTCTTTTCTTTTTTCGTGAAACCGCCGTG
GAGTTCATGAATTGTGGGAAAGCAGTTTACTCTCGGGTAGCAAGAGTATGCAAACATGAC
ACCGGCGGCAAGCACATTCTAAGCCAAAATTGGGCTACTTATTTGAAAGCCAGGCTCAAC
TGTAGCATACCAGGAGAATTTCCATTCTACTTTGATGAAATACAGAGCGTATATCAAATG
CCTGGTGACCCCAGTAGATTCTACGCAGCTTTTACGACCGGCGCCAGTGATGGCTTAATC
GGATCTGCAATTTGTACATACACCATGGAAGATATTCAAGAAGCTTTTGCCGGCAGGTTC
AAAGAGCAAGCGACTTCAAGTTCAGCGTGGCTGCCAGTACTAAGAGCCAGGGTACCCTCC
CCGCGACCGGGAACCTGTGTAAACTCTACAGAAGCATTGCCTGACAACGTTCTTAACTTT
ATAAGATCTCACCCGTTAATGGATTCTGCGGTGCGTCATGAAGGAGATACTCCAGCGTTT
TACAAACGTGACCTGGTCCTCACAACCTTAGTAGTGGACAGACAGTTTGTTGATATGCTT
GGAGATGATATCACATATACAGTGTTCTATGCTGGCACCAGTCAGGGTGAGGTATATAAG
ATAGTTCAGTGGACGGGCGGCGGATCTCGTGTGGCGGATGTGTGGCGCGCCGCTGGTGAC
GAGCCCGTCAGAGCTCTAGCGATCTCAAGACAGCTTCACGAGCTATACCTAGCCACAGAC
AATAGGCTGAGACAACTTCCGCTACGTGCGTGCGCGCACCGTTACGACAGTTGCGTGCGC
TGTGTGCTAGACCCCTACTGCGGTTGGGACAAGGAAGTGGGAGCATGTCGTCCGTACGCC
CCCGGGCTACTTCACGACGCCACAAACTCTACACCATCGATCTGTGAAGCCAGCGCCCCT
CTGAAAACAGTCAGGGCGGGCTACGGTCAGAGTGTACATCTGGCGGCATTTGGAAAAACG
CCAGAGTCGCTAAAAGATCAGCACGTTACTTGGTACCACCATTCTAGGGAGAAGGGTCGT
TATAAAATCATTTACAACTGGGAGCGAGTGCTTCAGACGTCAGAGCGCGGTTTAGTGTTA
CTGTCAGTGTCAGATTCTGACAGAGGACGTTACGAATGCTATTACGGGCCCACACTCATC
GCCTCGTATAATTTAGACATAGATATTCACAGATGTACACAACCTAACAAATCTCAGGAG
TATAAACAAGTTTACTCGGACTGGTGTCACGAATTCGAAAAATATAAGAGCGCAATGAAA
GCCTGGGAATCCAGACAACTGCAATGCTCCAAAAACACGAATGCATCGAGCCAGCAAAAC
AGCATGAGCAACGAGATAGTGGCCTCCCTGCGGTGA
Protein sequence:
MNEDRNTLYVGAMDRIFKLNMSDISQSHCERDALLLEASNVARCVSKGKSEPFECRNHIR
VLQPLGDGERLYVCGTNAHSPKDFVVYLNLTHLPRHEYVPGVGLGVAKCPYDPADNSTAV
WVTQGNPGGLPALYAGTNAEFTKADPVIFRNDLFDFRTGQKRFNFKRTLKYDSKWLDKTN
FVGSFDVGEYVLFFFRETAVEFMNCGKAVYSRVARVCKHDTGGKHILSQNWATYLKARLN
CSIPGEFPFYFDEIQSVYQMPGDPSRFYAAFTTGASDGLIGSAICTYTMEDIQEAFAGRF
KEQATSSSAWLPVLRARVPSPRPGTCVNSTEALPDNVLNFIRSHPLMDSAVRHEGDTPAF
YKRDLVLTTLVVDRQFVDMLGDDITYTVFYAGTSQGEVYKIVQWTGGGSRVADVWRAAGD
EPVRALAISRQLHELYLATDNRLRQLPLRACAHRYDSCVRCVLDPYCGWDKEVGACRPYA
PGLLHDATNSTPSICEASAPLKTVRAGYGQSVHLAAFGKTPESLKDQHVTWYHHSREKGR
YKIIYNWERVLQTSERGLVLLSVSDSDRGRYECYYGPTLIASYNLDIDIHRCTQPNKSQE
YKQVYSDWCHEFEKYKSAMKAWESRQLQCSKNTNASSQQNSMSNEIVASLR