| New model in OGS2.0 | DPOGS200510 |
|---|---|
| Genomic Position | scaffold13158:- 89-6113 |
| See gene structure | |
| CDS Length | 1773 |
| Paired RNAseq reads | 691 |
| Single RNAseq reads | 1793 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001706 (9e-126) |
| Best Drosophila hit | CG6654 (8e-27) |
| Best Human hit | zinc finger protein 782 (8e-40) |
| Best NR hit (blastp) | PREDICTED: rCG31912-like [Oryctolagus cuniculus] (5e-44) |
| Best NR hit (blastx) | ZNF816A protein [Homo sapiens] (2e-52) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0005739 mitochondrion GO:0005622 intracellular GO:0008270 zinc ion binding |
| InterPro families | IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type IPR022755 Zinc finger, double-stranded RNA binding IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL22679 |
Nucleotide sequence:
ATGGAAACTCATCATAACTTAGTTGAGATCGAATATAAACCGGAGTTGGACTCGCCTAAG
ACGATATGCCGCTGTTGTCTCTCGAGCGACCGACGGGTTGTGAAAATTGAGAATTACCGT
GAACTTTTCGTTGAACTGGCTGATATAATAGTGTCAGATTCCGATGGCCTCCCTCAGTGG
CTCTGCTGGGAGTGCAGTTGTCTTCTGCTGAAAAGTGTACGATTCAAGCAGAAAGTGCTT
AAAGCCCATCTCACACTTTACAACTATCATAGTAGATGTGCTCCGTTCCCCATAGACGGC
CAGGATCCTGAATTGACTAAGTACGCCAACCCGCAACTGAGCAGCTCGGCCACCCTGGTC
ATAGACAATGTCAAGACAAAAACGGGATACCATAAAGTTTTGGAGCATGAGAAAATCCAC
TTCATGCCGCCCTCGGACGATACTCACTTCCTGGATGAAGAGATTCCTCTCAAACTGGAG
ACGGAAGATGATGTGCCACTACAGGAGATACGAGAAAATAAATTGAAAGACCTGGCACTA
GACGGCTTCATGACAGAATCTAATCAAGAGAAGAAAGAAAAGACTAAGAAAACGAAAAAG
AAAGTTAAGACAAGAGTCACAGATAACATAAAGACAGAGAATGAGCTGGAGAGCGACACA
CAAGAGGCTAAAACACCAAAGAAAAGAAACCTTCGCAGAACTATAGACATAGACGAGAAC
AAGATACGAGTCATCACACTGGACCCGGCTGAACAGCTGAGGCAGAGACAGGCAGAGAAC
GAGGCCACACTGAAGTTCCCGTTCCAATGCCACCTCTGCTTCAAAGGTTTCAACTATGAA
GAGAAGCTCAAGAACCACATGTTCAAACACAGCCCGGCTCGTGGCAGTTACAAGTGCGAA
GTGTGCAGTATGTATCTACCCACACCGTACTCGGCATCTGTCCACGGTCTCACTCACACA
CTGAGGTATGAGTGTGTGCAGTGCGGGAGACGGATGACGGACAGGCTGGCTATAGTTAAT
CATTACAGATCTCAACACGAGGGGGTGCTCTCGGTCTACACTTGTCACATATGCGGGAAA
GTATCGAATAATGATAAGACTCACCGCGGTCACATGAGGAACCATCATTCTGGCTCCAGA
GCCGTCTGCAGGGAGTGCGGCAAGAGCTTCGTCAACAACGACTCCCTCGCCGAGCACATG
CTCATTCACCAGGGCATCAAGAACTACGAGTGTCCGGAGTGCGGCAAGAAGTTCCGCACG
AGGAACCAGATCAGGCACCACCTGGTCAAACACAGCGACCACAAGGAGTTCTACTGTGTG
GAGTGTGACGTCAGGTTCAAGTCAGCTCACACCCTCCGCCAACACTTGAAGAGGACGACG
AAACACAAAGACAAGAAGAGCCTCAAGTTCGCGTGCTCTCTGTGCCCGAAACGCTTCGAC
ACGTCGACACTGCTGGCGACACACACGCGCGTGCAACACGAGGGCTCGCGGCCACACCGC
TGCGAGGAGTGCGGCGCTTCGCTGGCGACGCGCGCCTCTCTACACAAGCACGCGCGCTCC
GTGCACCGGGGACTTCGCCCCCCGCCGTCGCACATCTGTCACGCGTGCGGCAAACTGTTC
CGGGCGAGGTCGACCCTAGTGAACCACGTGCGGACCCACACGGGGGAGAAGCCCTACCCG
TGCGAGGACTGCGGCCGGCGGTTCGCGCAGCGCACGGCGATGAGGACGCACGTGAAGCTC
GTGCACCTCAAGCAGAGAGGGCGGGAGGACTAG
Protein sequence:
METHHNLVEIEYKPELDSPKTICRCCLSSDRRVVKIENYRELFVELADIIVSDSDGLPQW
LCWECSCLLLKSVRFKQKVLKAHLTLYNYHSRCAPFPIDGQDPELTKYANPQLSSSATLV
IDNVKTKTGYHKVLEHEKIHFMPPSDDTHFLDEEIPLKLETEDDVPLQEIRENKLKDLAL
DGFMTESNQEKKEKTKKTKKKVKTRVTDNIKTENELESDTQEAKTPKKRNLRRTIDIDEN
KIRVITLDPAEQLRQRQAENEATLKFPFQCHLCFKGFNYEEKLKNHMFKHSPARGSYKCE
VCSMYLPTPYSASVHGLTHTLRYECVQCGRRMTDRLAIVNHYRSQHEGVLSVYTCHICGK
VSNNDKTHRGHMRNHHSGSRAVCRECGKSFVNNDSLAEHMLIHQGIKNYECPECGKKFRT
RNQIRHHLVKHSDHKEFYCVECDVRFKSAHTLRQHLKRTTKHKDKKSLKFACSLCPKRFD
TSTLLATHTRVQHEGSRPHRCEECGASLATRASLHKHARSVHRGLRPPPSHICHACGKLF
RARSTLVNHVRTHTGEKPYPCEDCGRRFAQRTAMRTHVKLVHLKQRGRED