New model in OGS2.0 | DPOGS201365  |
---|---|
Genomic Position | scaffold13:- 263483-267936 |
See gene structure | |
CDS Length | 1347 |
Paired RNAseq reads   | 255 |
Single RNAseq reads   | 708 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000686 (0.0) |
Best Drosophila hit   | hyperkinetic, isoform A (1e-121) |
Best Human hit | voltage-gated potassium channel subunit beta-2 isoform 2 (3e-86) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC013190 [Tribolium castaneum] (2e-142) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC013190 [Tribolium castaneum] (8e-138) |
GeneOntology terms    | GO:0007629 flight behavior GO:0005249 voltage-gated potassium channel activity GO:0008076 voltage-gated potassium channel complex GO:0006813 potassium ion transport GO:0016491 oxidoreductase activity GO:0055085 transmembrane transport GO:0005737 cytoplasm GO:0055114 oxidation reduction GO:0050802 circadian sleep/wake cycle, sleep |
InterPro families    | IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related IPR023210 NADP-dependent oxidoreductase domain IPR005983 Potassium channel, voltage-dependent, beta subunit, KCNAB IPR001395 Aldo/keto reductase |
Orthology group | MCL11872 |
Nucleotide sequence:
ATGTCTCGAAGCGAATCTACTGTCAGCAGGTGTACGCCGCATACACCACTGGGACCGCCT
GACTCCGTCAGCGTTGACTCCAATCCCATGCCCACCATATACCGATGCCGCGCTCCTATC
GCTTCTCTTGATTGTATGGATGAATTCAGCGCAAATTCACAGCAAATGCTGGACCAAGCT
GGAGAAATGCATGTTTCCAAAAATATGTCAGTTTATATGGGCAATCATGCTAGCATGCCA
TCTTCTGTGACTCCAGGGCTACGGTACAAAAATTTGGGAAAGTCTGGACTTCGAGTACCA
AATATAGGGCTTGGTCTGTGGACAATGTTGAATGAGGATTGCGCTGAAGATATAATCATG
ACAGCTTTAGAGAACGGCATTAATTTGTTTGACTTGTCAGAAGCACATTGTGCTAGAGGA
GAAGTAGAATTGGGACGTATTTTAAAGAAGAGGAATGTAAGACGAACAAGCGTCATAATA
ACCACCAAAATATATTGGAGCACTAAGTCCGATGAAAGAGGTTTATCTAGAAAACATATC
GTTGAGAGCATTAAGGCATCTTTACAAAGACTTCAAATAGATTACATTGACGTGGTCCTG
CTCCACAAAACTGATCCGGTTTGCCCTATGGAAGAGTTGGTACGTGCTATGAATTTTGTA
ATAAACCAAGGATGGGTTATGTACTGGGGAACAGCTCGTTGGTCTCCTTCTGAGATCATG
GATGCGTACACAAATTGTAGACAGTTCAACTGTGTAACGCCTATTGTCGAACAGACCGAA
TATCATATGTTCTGTAGAGAGAAAGCAGAGCTTTATATGCCTGAGCTATATCACAAAATC
GGCGTGGGGATGATAGCTTGGTCTGCGATTACCACTGGAAAGGGACTTGGTCGTGAGGAA
ATAACAGGTTTATTTGCAAAATCCCGTTTCAATAGAAAATATAGTACATTCAGTTGGTGT
GAAGAGGACCTTGCAGTACCTGATGTCAGCGAGATGCGGATTTCCGGTAGCAAAGAACAA
GTTGCAGGAGAAGAGCCACGCACTTATGGCGATAAACTTCGTGACCTTGCTAATTTAGCA
AACACAATGAATTGTTCCATGAGCCAATTGGCAGTTGCATGGTGTCTTAAGAATGAATCC
GTTAATTGTTTGTTACTAGGTGCTTTTAGTGTTGAGCAATTTAAAGAAAATATTCATGCT
TTGCAGATCGTTCCTCAGCTAACTCCATCTGTAATGGTGGAAATCGAGCGACTTTTGTCC
AATAAGCCACAACGTCCTCCAATGGTATCAACGCTTGCAATGCGCAATCAACAGAACAGT
AACACTGTCAGAATCGATATGACGTAA
Protein sequence:
MSRSESTVSRCTPHTPLGPPDSVSVDSNPMPTIYRCRAPIASLDCMDEFSANSQQMLDQA
GEMHVSKNMSVYMGNHASMPSSVTPGLRYKNLGKSGLRVPNIGLGLWTMLNEDCAEDIIM
TALENGINLFDLSEAHCARGEVELGRILKKRNVRRTSVIITTKIYWSTKSDERGLSRKHI
VESIKASLQRLQIDYIDVVLLHKTDPVCPMEELVRAMNFVINQGWVMYWGTARWSPSEIM
DAYTNCRQFNCVTPIVEQTEYHMFCREKAELYMPELYHKIGVGMIAWSAITTGKGLGREE
ITGLFAKSRFNRKYSTFSWCEEDLAVPDVSEMRISGSKEQVAGEEPRTYGDKLRDLANLA
NTMNCSMSQLAVAWCLKNESVNCLLLGAFSVEQFKENIHALQIVPQLTPSVMVEIERLLS
NKPQRPPMVSTLAMRNQQNSNTVRIDMT