| New model in OGS2.0 | DPOGS201367 |
|---|---|
| Genomic Position | scaffold13:- 232800-242270 |
| See gene structure | |
| CDS Length | 1617 |
| Paired RNAseq reads | 53 |
| Single RNAseq reads | 218 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000688 (5e-155) |
| Best Drosophila hit | CG12061, isoform C (6e-64) |
| Best Human hit | sodium/potassium/calcium exchanger 5 precursor (3e-67) |
| Best NR hit (blastp) | potassium-dependent sodium-calcium exchanger [Culex quinquefasciatus] (6e-149) |
| Best NR hit (blastx) | potassium-dependent sodium-calcium exchanger [Culex quinquefasciatus] (5e-132) |
| GeneOntology terms | GO:0055085 transmembrane transport GO:0016021 integral to membrane GO:0003674 molecular_function GO:0016020 membrane |
| InterPro families | IPR004481 K+-dependent Na+/Ca+ exchanger-like IPR004837 Sodium/calcium exchanger membrane region |
| Orthology group | MCL10238 |
Nucleotide sequence:
ATGACAAAAAGCAGACGTACCTCGTTCGGAGGCATTCATCTCGTTGACGGAGGGATCACA
CGGATACGACCGAGAGCGTTGTCAGTGGCGTCCAAATGCCGCGGCCAGCGCTCGGCGGCA
CATAATGGGAAATGGCGGAGAGCTCGTCAAAAGAAGAATACAGGAGCCAATTATTTATTT
TTATACAATACACGTGAATCATATTCAAGTCGTCACCTGTTAACTTTAGTCGAAAGCAAT
GCTAATTGTACTCCGGCAGCAATTTTGGAATTTCCATCCGATGGTCTAACGAGATTTCAG
AGACAGCATGGTTATATTCTAATTCATTGTGTACTGGCGATATACTGTTTCCTTCTGCTG
GGCACCGTCTGCGAACAATACTTCGTGCCTGCGATCGAGATAATATGCGAACGCTTAGAC
ATGGCATCCGACGTAGCTGGAGCAACCTTCATGGCGGCTGCCAGTTCAAGTCCAGAACTG
TTCATCAACTGCGTAGGCACATTTGTGACGGAAGGAGATTTAGGAGTTGGGGCAATAGTA
GGCTCCGCAGTGTTCAATGTCCTTGCTGTGCCTGCATGCTGCGCCTTGGTTGCTGGCAAA
AGTATTGAATTGGACTGGTGGTCAGTATCTCGAGACTGCATGATGTACGCAGTAGCTGTA
GTGGCCTTGATACTAACGCTGCTTGACGACAAGGTCTTCTGGTACGAAGCACTTCTACTC
GTACTGATGTACACTTTTTATATTCTCGCTATGGTCTACAATGGAAGTCTTGGTTCATTC
GCTAGAAGTGGCTGTTGCTATTTCAACAAACCCAAGAAATACACAGAAATTACTCCACTT
CTACATAAAGAAAAAAGTAACCCTTTGGAGGCCTCGCAACGCATGACGCATGTCAATCAA
AACATCAATGACTTGGAGAACGGAATTGAGGTTACAAAACGACATAATTCAACTGATTCT
GAATCAAGTTTAAACTCTCTCTGGTCGTGGCCAGATGAAAAAACATCTGGCACCCAAAAA
ATCTTGTGGATGGTGACGTGGCCGATCAGCTTGATACTATGGATCACCATACCTGACTGT
CGTAAGCGCACCCGGCTCTATCCTCTCACCTTCATCATGTGTGTTACTTGGATAGGAGGA
GTATCTTACTTGGTAGCCTGGATTATTACTATTGTTGGTGACACTCTTAATGTACCCGAC
AGTATAACAGGACTAACAATTTTAGCAGCAGGCACAAGCCTCCCGGAAGCAGTGTCCAGT
GTTCTTGTAACAAATCAAGGACACGGAAATATGGGTATAAGCAACTCCATAGGTTCCAAC
ACCTTCGATATACTTCTGTGTTTGGGGCTGCCTTGGCTTATTAAGTCACTGTTCTATCCG
TCCTATCCCGACAACCACTGGGTAAAGATAAATTCCAGCGGGTTATCCTACAGCGCCATC
TCTCTCCTTTCCACGTTATTAGCTCTATACAGTTGTCTTGCTCTGAATAAATTTCAATTA
GACTGGAAAATAGGAATCACGTGTGCGTTCATTTACGCCGGGTTTTTGTTAATGGCTTCT
TTGATTGAACTTAATATTCTTTTTGATGTGAATTTACCAATTTGTGCCCATTTATAA
Protein sequence:
MTKSRRTSFGGIHLVDGGITRIRPRALSVASKCRGQRSAAHNGKWRRARQKKNTGANYLF
LYNTRESYSSRHLLTLVESNANCTPAAILEFPSDGLTRFQRQHGYILIHCVLAIYCFLLL
GTVCEQYFVPAIEIICERLDMASDVAGATFMAAASSSPELFINCVGTFVTEGDLGVGAIV
GSAVFNVLAVPACCALVAGKSIELDWWSVSRDCMMYAVAVVALILTLLDDKVFWYEALLL
VLMYTFYILAMVYNGSLGSFARSGCCYFNKPKKYTEITPLLHKEKSNPLEASQRMTHVNQ
NINDLENGIEVTKRHNSTDSESSLNSLWSWPDEKTSGTQKILWMVTWPISLILWITIPDC
RKRTRLYPLTFIMCVTWIGGVSYLVAWIITIVGDTLNVPDSITGLTILAAGTSLPEAVSS
VLVTNQGHGNMGISNSIGSNTFDILLCLGLPWLIKSLFYPSYPDNHWVKINSSGLSYSAI
SLLSTLLALYSCLALNKFQLDWKIGITCAFIYAGFLLMASLIELNILFDVNLPICAHL