| New model in OGS2.0 | DPOGS201373 |
|---|---|
| Genomic Position | scaffold13:- 52458-63764 |
| See gene structure | |
| CDS Length | 1644 |
| Paired RNAseq reads | 143 |
| Single RNAseq reads | 440 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000535 (8e-149) |
| Best Drosophila hit | CG7369 (8e-41) |
| Best Human hit | ras-GEF domain-containing family member 1B (2e-68) |
| Best NR hit (blastp) | PREDICTED: similar to RasGEF domain family, member 1B isoform 2 [Apis mellifera] (5e-87) |
| Best NR hit (blastx) | PREDICTED: similar to RasGEF domain family, member 1B isoform 2 [Apis mellifera] (6e-77) |
| GeneOntology terms | GO:0051056 regulation of small GTPase mediated signal transduction GO:0005622 intracellular GO:0005085 guanyl-nucleotide exchange factor activity |
| InterPro families | IPR001895 Guanine-nucleotide dissociation stimulator CDC25 IPR000651 Ras-like guanine nucleotide exchange factor, N-terminal IPR023578 Ras guanine nucleotide exchange factor, domain IPR008937 Ras guanine nucleotide exchange factor |
| Orthology group | MCL10990 |
Nucleotide sequence:
ATGTATTACTACGCAAGTAAATTGAATGAAGCATCATGTAGCGGATGTAATGTGAAGCTG
CCGCCACCTCCTGCCGAGCCAGCTCCACCACCTCCTGAACATTCATCTCTTCCCACTGAA
TCTTCACTTCTCCATGGCACTGGACTCTCTTATTATGATAATGATGACTACTATTCAATG
GTGAGAGGTAACAAGTTCATGTCGGAGAACAGCTGCAAACAAATGGTGATGAATGGTGGT
ATCAGTTTCACCGCTGCCGCTGTGGAGCCTAATCAGTTGTCAACGGTACTATCACCGACT
GCGAAATCGTCGAGTCAATACACCGAGAAATCGGATGTGGAGTATAAAGATGGTAACATA
GTGAGCTCAACTTTTGATGGGCTGGTGGACATGCTGCGGCCCGGTGCCACGAAGTCCTTC
ACGTTTACTTTTATTCTGTGCTCACGGCTGTTCGTCAAGCCTCACGAACTGCTGGCAAAG
CTTTGCAAGCGGTACTTCACCAATTATGATAAGGTGGGTAAGAACGAGATGAAGGAGCTG
ATGGATCGCGAGGTGACGGAAATGACGTCACTGGTCCGTGTTCTCAGCCAATGGACCGCC
ATGTTTCCATACGACTTCCGCGACGACCGCGTCATGGCCCTCGTCAGGAGCATCACCCAG
AGATGTGCCGCGGAACATATGTCTTCTATTAGATCCGAGGTGTCAAGTATGCTGGAACGG
TTGTTGGACAAACTGACAGCCCTGGAACAGTATGAGGAGACACTGGTGGACGTGCCGCAA
GTGTCCAACTGCGATCAACTTCCAGCTGGCGATATCCTGACACTCGGTTTGAGTCCAGTC
GAGTTGGCGAACCAGCTGACCATAGTGGAGCTTCATAGGCTCTCGTTCGTGGGTCCGGAG
GAGTTTGTTCAAACTTTCGCACCATCTCAGCCGCAGACCTCAACTTCTAGCATCAGTCTA
CATCACGCAGAGACTAAGAGCACCAAGAATTTAGAAGCTTATGCTGACTGGTTCAATAGA
CTCAGCTATCTGGTTGCTACGGACATCCTGAAGGCAGTAAAGAGCAAATATCGGGCTCGT
GTGATGGAACAGTGGGTAATGACAGCTAGAGAGTGCTTCAACCTTGGCAACTTCAATTCA
CTAATGGCCATCATCAGTGCCCTCAACATGGCTCCCATCACCAGGCTTAAGAAAACGTGG
AGTCGTACGAGCGCTGTCTGCGGTCAACAGTTGCGGCAATTGGAATTGTGCGTTGAACCT
AGTGGAAATCACGCCAGGTATCGTGCGGCCTTGGCGGCTGCTCCTACAGAGACGGCTGTA
CCGCTGCTGTCTGTCACCTGCCGAGATCTGCACTTCGCTAACCAGGGGTCGCCGACCAAG
CTGTCCGGTAACCGTGTGAACTTCAATAAGTGTACGCTGGTCGCTCGTCACGTGTCCTCT
CAGCTGGCTTCCCGCCGTCTCCTGGTGGATGGTCCACCGGTCACGGCTCCCCCACCACCA
CACCTGCATCTACCCGCCTGGCGCTTCTTAAGCAATAGACCATCGCTCACTGAACTCGCC
CTAGAACTAACATCGTTCGAACGGGAGCCTCCAGTGGATCATCTTGAGAAGGAGCGACTG
AAGAGATTACGAGGCGCTACTTAA
Protein sequence:
MYYYASKLNEASCSGCNVKLPPPPAEPAPPPPEHSSLPTESSLLHGTGLSYYDNDDYYSM
VRGNKFMSENSCKQMVMNGGISFTAAAVEPNQLSTVLSPTAKSSSQYTEKSDVEYKDGNI
VSSTFDGLVDMLRPGATKSFTFTFILCSRLFVKPHELLAKLCKRYFTNYDKVGKNEMKEL
MDREVTEMTSLVRVLSQWTAMFPYDFRDDRVMALVRSITQRCAAEHMSSIRSEVSSMLER
LLDKLTALEQYEETLVDVPQVSNCDQLPAGDILTLGLSPVELANQLTIVELHRLSFVGPE
EFVQTFAPSQPQTSTSSISLHHAETKSTKNLEAYADWFNRLSYLVATDILKAVKSKYRAR
VMEQWVMTARECFNLGNFNSLMAIISALNMAPITRLKKTWSRTSAVCGQQLRQLELCVEP
SGNHARYRAALAAAPTETAVPLLSVTCRDLHFANQGSPTKLSGNRVNFNKCTLVARHVSS
QLASRRLLVDGPPVTAPPPPHLHLPAWRFLSNRPSLTELALELTSFEREPPVDHLEKERL
KRLRGAT