New model in OGS2.0 | DPOGS201381  |
---|---|
Genomic Position | scaffold13:+ 135378-152534 |
See gene structure | |
CDS Length | 1788 |
Paired RNAseq reads   | 258 |
Single RNAseq reads   | 774 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000696 (0.0) |
Best Drosophila hit   | CG5522, isoform B (9e-120) |
Best Human hit | ras-specific guanine nucleotide-releasing factor RalGPS2 (5e-94) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC002561 [Tribolium castaneum] (9e-151) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC002561 [Tribolium castaneum] (8e-153) |
GeneOntology terms    | GO:0005085 guanyl-nucleotide exchange factor activity GO:0007264 small GTPase mediated signal transduction GO:0005622 intracellular |
InterPro families    | IPR001895 Guanine-nucleotide dissociation stimulator CDC25 IPR011993 Pleckstrin homology-type IPR001849 Pleckstrin homology domain IPR023578 Ras guanine nucleotide exchange factor, domain IPR008937 Ras guanine nucleotide exchange factor |
Orthology group | MCL15166 |
Nucleotide sequence:
ATGCCGCGAGATATTCTGAGCGATAGCCTGGCTGTGCTTAGAATTGTTGAGCATGAGGAT
GAAGAGAATTGGCAACTTGAAGATAAGGCATCCTGTAAACAAACAAAAACAGTGAAAAGT
GCCTGTGATAAAATTGCCAGTGATCAATCTTACATTAAAGATGAGTGTTGTTATTACAAT
TACATTGTTGGTGAAGGTGCAACAAATCGTCAGTGTGATCCCGTTTACCAATTTAAAACA
AATAGCTTACCTGCAGCTTCGTCAATGAGTCAATCATGGGACACCATGGTATGTTCAGTA
TTGAGAATTGCTCCAGAGGATATCGCTAATCAGTTGTCGTTATTGGACCTGTTATGTTTT
AAATCAATCAAGCCTGAAGAACTTACAACTTGTGGATGGACAAAATTAAACAAATTAATG
GTAGCTCCTAATGTAGTGGCCTTTACAAAAAGATTTAATAGGGTGAGTTTTTGGACTGTA
CAGGAAATACTAAATGGTCAATCACCTAAGGTGCGAGCTGAAACATTGGCCCACTTTATA
AAGGTGGCAAAGAAATTATATGATCTTAACAATCTTCACTCTCTTTTTGCTGTCATCTCT
GCTCTGACTAGTGCTAGTATATATAGATTGACAAAGACTTGGGCATGTCTATCCAAGAAA
GATAAGCAACAGTTTGACAAGTTGGCAGAGTTATTTGGTGACAAGGACAATTGGATGACT
TTGAGGGAATATATGCGTTCTATATCTCTCCCGTGTATTCCATACTTAGGTATTTTCCTC
ACGGACCTTGTATACATTGACATAGCTCATCCATCTGGTTCGCCGCATCGTGTCGCCAAA
ATGGCGGTGGTGTTGAAAGCCTTGGAAAGATACCAAACATCTGAGTACACTATAACACCA
GTCCCACATGTCGCTAATTATCTAAACAGCGTCCGATACATTGAAGAGCTTCAGAAGTTT
CTAGAGGACGATCAGTACAAGTTGTCTTTAAAGTTGGAGCCTCCGTCCCCTATCGGCAGC
TGCGCTGGTTCAAAGGAATCGGTCAAGGAGGTCCAAGGGCCCTCGACACCATTCACCCTA
TCCCCTTCGCACAGACTTGGCTCAGGGTCTTTAAGACTCCAGGGGTCATATACTCAAGCT
AAATTCATACCGACCCATAGAAAATGCCGGTCGCTGGGATCCAAGTTTCGAAGCGCGAGC
TTACCAAGAAATTTTCACAAGGTCAATTTCGGTGTCGGTATCTTTGGTAAAAGTCACAGC
GAAGATAAAGATGAGAGAACGCCGGCGGGTTCTGTTAATTTGTTAGATGACACGCTGTTG
GAGTCACCGAGTTGGCCCACGGCTGGTGCTAAGACTTCAAAACCATTGCCTTTCAGTGAT
GGTTCGTCTGTTATGGACTCGGTGGAGTGCGAGTTTCAAAGTTACGTCCGCAGAAAAACT
ATCATAAAGGACGGGAGAAAGATATCTCTGTCGTCATGGCAACGGTACTGGTTACAGATA
TCCGGGAACGTTCTTATTTTCTACAGCTCAAAGACATTCAAAGGAACTAGTCGTAACGAC
TTCAGCAAGGAGCGCTGTAAGGTGGTAGAACTACATGACGGATGGCGTGCAGCTCTAATG
GATTGTGAGGCTCAGGATGCTTTCCAGCTAGTCGATCATCGAACTGGCACCATATATAAA
TTCAAAACTGGAAACGATTCAACAGCGAAGCAATGGGCGGCAAGGATCAATGACGTCACC
AACAAATTGGTGACGCCGTTGCCAGCGAATCTTATGTCATTCGAATAA
Protein sequence:
MPRDILSDSLAVLRIVEHEDEENWQLEDKASCKQTKTVKSACDKIASDQSYIKDECCYYN
YIVGEGATNRQCDPVYQFKTNSLPAASSMSQSWDTMVCSVLRIAPEDIANQLSLLDLLCF
KSIKPEELTTCGWTKLNKLMVAPNVVAFTKRFNRVSFWTVQEILNGQSPKVRAETLAHFI
KVAKKLYDLNNLHSLFAVISALTSASIYRLTKTWACLSKKDKQQFDKLAELFGDKDNWMT
LREYMRSISLPCIPYLGIFLTDLVYIDIAHPSGSPHRVAKMAVVLKALERYQTSEYTITP
VPHVANYLNSVRYIEELQKFLEDDQYKLSLKLEPPSPIGSCAGSKESVKEVQGPSTPFTL
SPSHRLGSGSLRLQGSYTQAKFIPTHRKCRSLGSKFRSASLPRNFHKVNFGVGIFGKSHS
EDKDERTPAGSVNLLDDTLLESPSWPTAGAKTSKPLPFSDGSSVMDSVECEFQSYVRRKT
IIKDGRKISLSSWQRYWLQISGNVLIFYSSKTFKGTSRNDFSKERCKVVELHDGWRAALM
DCEAQDAFQLVDHRTGTIYKFKTGNDSTAKQWAARINDVTNKLVTPLPANLMSFE