| New model in OGS2.0 | DPOGS201386 |
|---|---|
| Genomic Position | scaffold13:+ 242510-249446 |
| See gene structure | |
| CDS Length | 1584 |
| Paired RNAseq reads | 359 |
| Single RNAseq reads | 1152 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000538 (5e-171) |
| Best Drosophila hit | CG2893, isoform F (7e-140) |
| Best Human hit | sodium/potassium/calcium exchanger 4 isoform 2 precursor (1e-87) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC014488 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC014488 [Tribolium castaneum] (2e-164) |
| GeneOntology terms | GO:0008273 calcium, potassium:sodium antiporter activity GO:0016021 integral to membrane GO:0055085 transmembrane transport |
| InterPro families | IPR004481 K+-dependent Na+/Ca+ exchanger-like IPR004837 Sodium/calcium exchanger membrane region |
| Orthology group | MCL10238 |
Nucleotide sequence:
ATGGCTAAACATGTAACAGATGGGTACCTCCGCAATTGCACGCCTCCTGCCATCGACGAC
TTTCCGGCGGGACTTTTCACGGAGCTGGAAAGACAACATGGTGCCATTGTACTTCATGCA
TTAATCTCCATCTACCTTTTTTTGGCATTGGCCGTTGTCTGCGATAAGTTCTTTGTTCCC
GCGGTAGATAGGATATGTACGGCTCTTAATATGACGAATGACGTCGCTGGTGCTACTTTC
ATGGCAGCAGCGACTTCAGCACCAGAGTTATTTGTCAATGTTATTGGAACTTTTATTACT
GAGGGTGACATAGGAGTTGGTACCATCGTTGGGTCGGCGGTTTTCAATATTCTTGCAGTG
GCTGCTTGTTGCGGTATAGGGGCTGGGATGGTAGTGCCTTTGGACTGGTGGCCATTAACC
AGGGACTGTCTTGCATATGGTATCACTGTTTCTATTTTGATTTGTATAATGCATGATGAA
TATGTGCAGTGGTATGAAGCCTTCTTCTTGGTTCTGCTGTATGGAGTGTACATTTGCATT
ATGTACTACGACAAATCAATTCAAAATTTCGCTAAAGGGAGTTGGACGTGTGTGTCCAAT
ATGTTAAAAAAAGACAGTGAAAAGCAAGAAACTCCTTTGTCTTTGGAAAATGAAAATAAG
GAAAAAAAGTCAACATCTTCCATTAAGAATGAATCATTAGTAGAGCATCACCAACATAAT
GGTAATGTCAAAAACATAACTCTTTATGCAGATACAAACGAAAAGAAAAATGTTATCGAT
ACTGAACTACAAATTGACAAAACTAAAATTGAAGAAACAAACGAAGAGGAACACAGAATT
AGTAATATGGAAATAGCTACACCAGAAGATGGAAATCGCGAAAATATTGAACAAGGGAAC
AAAGAATCGATAGATGAGTATGAACACTCTCTGTGGAAATGGCCATCAGGAAGAAGTAAT
CTCACAAAGATAACATGGATTATTACATGGCCGATACATCTCGTCTTTTTCTTTACGATT
CCAGATTGTGAGAAACCGCGATTTAAGAATTGGTTTCCCTTAACTTTTATCATGTGTATA
GTTTGGATAGGATCACTTTCATACATCGTAGCTTGGATGATAACTATAATTGGTGATACC
TTAATGATACCAGATTCAGTTATGGGAATAACATTTTTAGCAGCGGGTACATCTGTACCC
GAAGCAGTATCAAGTGTTATAGTTGCAAAACAAGGACATGGCTCAATGGGCATCAGTAAT
TCGATTGGATCAAACACATTTGATATTCTTCTGTGTCTAGGTCTACCATGGCTTATTAAA
GCTTCGTTAACACCCGCTGAACCTGGTCATTATTGGGTGAAGATAAACTCTATGGGTCTT
GAGTATTCGGCGATATCGCTGCTATCAACTTTGTTGCTGCTTTATCTTACGTTTTGGTTC
AACAAGTTTAAGCTCGATGCAGCTGTCGGGAGGGCTTGTTTAGCCATGTATGCCATGTTT
TTAGTTCTTGCTACTCTTATTGAGTTAAATGTTTTCTTCCCTGTAAATGTTCGCACTTGC
AGGAGAAACGAATTAAAATCTTAA
Protein sequence:
MAKHVTDGYLRNCTPPAIDDFPAGLFTELERQHGAIVLHALISIYLFLALAVVCDKFFVP
AVDRICTALNMTNDVAGATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAV
AACCGIGAGMVVPLDWWPLTRDCLAYGITVSILICIMHDEYVQWYEAFFLVLLYGVYICI
MYYDKSIQNFAKGSWTCVSNMLKKDSEKQETPLSLENENKEKKSTSSIKNESLVEHHQHN
GNVKNITLYADTNEKKNVIDTELQIDKTKIEETNEEEHRISNMEIATPEDGNRENIEQGN
KESIDEYEHSLWKWPSGRSNLTKITWIITWPIHLVFFFTIPDCEKPRFKNWFPLTFIMCI
VWIGSLSYIVAWMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVAKQGHGSMGISN
SIGSNTFDILLCLGLPWLIKASLTPAEPGHYWVKINSMGLEYSAISLLSTLLLLYLTFWF
NKFKLDAAVGRACLAMYAMFLVLATLIELNVFFPVNVRTCRRNELKS