| New model in OGS2.0 | DPOGS201398 |
|---|---|
| Genomic Position | scaffold13:+ 554668-557964 |
| See gene structure | |
| CDS Length | 1173 |
| Paired RNAseq reads | 10 |
| Single RNAseq reads | 25 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002000 (5e-136) |
| Best Drosophila hit | tailless (7e-78) |
| Best Human hit | nuclear receptor subfamily 2 group E member 1 (4e-83) |
| Best NR hit (blastp) | Orphan nuclear receptor NR2E1, putative [Pediculus humanus corporis] (3e-108) |
| Best NR hit (blastx) | GI22125 [Drosophila mojavensis] (4e-82) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0043565 sequence-specific DNA binding GO:0008270 zinc ion binding GO:0003707 steroid hormone receptor activity GO:0005634 nucleus GO:0046872 metal ion binding GO:0005496 steroid binding GO:0007275 multicellular organismal development |
| InterPro families | IPR001723 Steroid hormone receptor IPR001628 Zinc finger, nuclear hormone receptor-type IPR013088 Zinc finger, NHR/GATA-type IPR008946 Nuclear hormone receptor, ligand-binding IPR000536 Nuclear hormone receptor, ligand-binding, core |
| Orthology group | MCL13864 |
Nucleotide sequence:
ATGGAAATGCAGTCTATGCCAGCATCATCAAGTCGTATTCTATATGATGTCCCTTGTGCC
GTATGTCGAGATCATTCTTCGGGAAAACATTACGGAGTGTTTGCATGCGACGGATGTGCT
GGTTTTTTCAAGAGATCAGTGCGACGAGACCGTAGATATGCTTGCAAAGCTAGAAACTCC
GGAGCTTGCTTGGTCGACAAAGCACATAGAAATCAATGTCGTGCTTGTAGATTAGCCAAA
TGTCTCGATGTCGGTATGAATAAAGATGCTGTTCAGCATGAGAGAGGACCAAGAAATTCT
ACGATTCGACGGCAAATGGCTTTATTTTTAAAAGATCCAGCACTACCCGCTTCCGAAATG
TCTTTAATGCCTCCAGTTTTGGATTTGGCTATACCAAAGCACTCTCTGCTACCACCCCCA
CCACCTTTATCTTTATTTCACAATCCCTATCAATCTTATAGCAGATTTAATTTATTAGCG
TCTCCATTACCGTCTTGTCCACTGAAAGCTCCATCGCCGCCGCCACCCATGACATCAAAT
TTAATAAGCCCCACTGAACCAGAAGCAATTTGTGAAGCAGCCGCCCGATTATTATTTATG
AACGTTAAGTGGGCCAAAAATGTTCCAGCCTTCTCGTCTTTGTCTTTGCAAGATCGATTG
ATATTATTAGAAGAATCATGGCGAGATCTGTTTGTAATTGGATCGGCACAATTTCTATAT
CCCCTTGACTTAAAAGTTCTCGTAAACACAAAACATACAAAAGTAGATTCTAAACATATC
GCAGATTTCGAAAAGGCTCTTATAGAGCTAACAAAGATGCATCCAGATAATAACGAGTAT
GCATGTCTTCGAGCAATTGTTTTATTTAAAACAAATTTCAATGCTGTCCATACGAACAGT
TTGCCCCAATCCCATATTGAAATTAAGAAACTAAAAGACCTACCTGCAGTAGCTAGTTTG
CAAGATCATTCTCAAGCTGTTTTAAACGAGTATATTACCAGATTATATCCAGGAGATACA
ACACGATCAAATCAATTGCTCCAAAGTTTGTCTGCAGTCCGAAATGTTTCAAGTACTACA
ATAGTGGAACTATTTTTCCGAGCTACCATAGGAGATATACCGATTGAAAGAATAATAAGT
GATATGTACAGAAGCGGCAAAGATACTGTTTAA
Protein sequence:
MEMQSMPASSSRILYDVPCAVCRDHSSGKHYGVFACDGCAGFFKRSVRRDRRYACKARNS
GACLVDKAHRNQCRACRLAKCLDVGMNKDAVQHERGPRNSTIRRQMALFLKDPALPASEM
SLMPPVLDLAIPKHSLLPPPPPLSLFHNPYQSYSRFNLLASPLPSCPLKAPSPPPPMTSN
LISPTEPEAICEAAARLLFMNVKWAKNVPAFSSLSLQDRLILLEESWRDLFVIGSAQFLY
PLDLKVLVNTKHTKVDSKHIADFEKALIELTKMHPDNNEYACLRAIVLFKTNFNAVHTNS
LPQSHIEIKKLKDLPAVASLQDHSQAVLNEYITRLYPGDTTRSNQLLQSLSAVRNVSSTT
IVELFFRATIGDIPIERIISDMYRSGKDTV