| New model in OGS2.0 | DPOGS201401 |
|---|---|
| Genomic Position | scaffold13:+ 580048-586406 |
| See gene structure | |
| CDS Length | 1869 |
| Paired RNAseq reads | 6294 |
| Single RNAseq reads | 14338 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002004 (0.0) |
| Best Drosophila hit | CG9281, isoform C (0.0) |
| Best Human hit | ATP-binding cassette sub-family F member 2 isoform b (0.0) |
| Best NR hit (blastp) | ATP-binding cassette sub-family F member 2 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | ATP-binding cassette sub-family F member 2 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005215 transporter activity GO:0042626 ATPase activity, coupled to transmembrane movement of substances GO:0043190 ATP-binding cassette (ABC) transporter complex GO:0005524 ATP binding |
| InterPro families | IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR003593 ATPase, AAA+ type, core |
| Orthology group | MCL13372 |
Nucleotide sequence:
ATGCCTTCGGACGCAAAGAAACGAGCCCAGCAAAAGAAAAAAGAACAAGCTACTAATAGA
AACAAGAAGCCTGTGGCAAGAGTGACGACTGCAGAGACGAATGGTTCTACAAATGGTGCG
GTAAAAGAAGATCGAGAGCTCACTGCTGAAGAGGCACTATGTCTGAAGCTGGAGGAAGAA
GCGAAAATGAATTCTGAAGCCCGGTCCTGCACTGGTTCATTGGCAGTTCATATAAGATCA
AGGGATATAAAGATTGCAAATTTTTCCATCACTTTTTATGGCAGTGAATTGCTACAAGAC
ACATTGCTAGAGTTGAACTGTGGTCGAAGATATGGCCTTGTTGGTCTTAATGGCTGTGGT
AAGTCATCATTGCTGGCTGTGTTGGGTCGGCGGGAGGTACCAATACCAGACCACATTGAT
ATTTTCCATTTAACTCGTGAGATGCCAGCATCAGATAAAACAGCCTTGCAATGCGTTATG
GAAGTTGATGAAGAGAGAATCAAGTTGGAGAGACTTGCTGAGGAACTCGCCCAGTGTGAT
GACGATGAATCCCAGGAACAGCTGTTGGATGTTTATGACCGTCTAGATGATTTAAGCGCT
GACACTGCCGAGGCTAGAGCAGCCCATATTCTTCATGGTCTAGGATTCAGCAAGGAGATG
CAACAAAAGGCGACCAAGGATTTCTCAGGAGGTTGGCGTATGAGAATTGCTTTGGCGCGT
GCGTTATATGTGAAGCCACATCTGCTTTTGTTGGACGAGCCAACTAACCATCTTGATTTA
GACGCCTGTGTGTGGCTTGAAGAGGAACTCAAACAATATAAGAGAATCCTAGTGCTGATA
TCGCACTCTCAAGATTTTCTGAATGGAGTTTGTACCAATATAATTCACATGAGCAAGCGT
AGGCTGAAGTACTACACTGGTAACTATGAGGCCTTCGTAAGGACCCGCATGGAGTTGTTG
GAGAACCAGATGAAACAGTACAATTGGGAACAAGATCAGATCGCTCATATGAAGAACTAC
ATAGCTCGGTTTGGTCACGGTTCAGCTAAACTCGCTCGTCAGGCCCAGTCAAAGGAGAAG
ACACTAGCCAAGATGGTAGCTCAAGGTCTTACTGAGAAGGTGACGGATGATAAGATACTC
AACTTCTACTTCCCGTCATGCGGGAAAGTACCACCGCCCGTTATCATGGTTCAGAATGTT
TCATTCCGCTACACAGACAGTGGACCTTGGATATATAAGAATCTGGAGTTCGGTATAGAT
CTGGACACCCGGCTAGCGCTCGTCGGACCAAATGGAGCAGGAAAGTCTACGTTGTTGAAA
CTTCTATATGGAGATTTGGTGCCGTCGACAGGTATGATCCGTAAGAATTCTCATTTGCGC
ATCGGTCGTTACCACCAGCACCTTCACGAGCTGTTAGATCTAGACTTGTCCCCGTTGGAG
TATATGATGAAGGAGTTCCCAGAAGTACGAGAAAGGGAGGAAATGAGAAAAATCATTGGA
AGATATGGTCTTACTGGAAGACAACAGGTGTGTCCAATGCGTCAGTTGTCTGATGGCCAA
CGTTGTCGCGTTGTATTCGCCTGGCTGGCGTGGCAGACACCTCACCTGCTGTTGATGGAC
GAACCGACCAATCACTTGGATATGGAGACCATAGACGCCCTCGCTGACGCCATTAACGAC
TTCGACGGCGGTATGGTGCTTGTCAGCCACGACTTCAGACTTATCAACCAGGTCGCCGAA
GAAATTTGGATCTGCGAGAATGGTACAGTAACCAAATGGCAAGGAGGTATCCTGAAATAT
AAAGATCATTTGAAATCTAAGATCTTGAAAGATAACGCCGATAATGCGGCGAAATTCAAC
CGCAAATAG
Protein sequence:
MPSDAKKRAQQKKKEQATNRNKKPVARVTTAETNGSTNGAVKEDRELTAEEALCLKLEEE
AKMNSEARSCTGSLAVHIRSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCG
KSSLLAVLGRREVPIPDHIDIFHLTREMPASDKTALQCVMEVDEERIKLERLAEELAQCD
DDESQEQLLDVYDRLDDLSADTAEARAAHILHGLGFSKEMQQKATKDFSGGWRMRIALAR
ALYVKPHLLLLDEPTNHLDLDACVWLEEELKQYKRILVLISHSQDFLNGVCTNIIHMSKR
RLKYYTGNYEAFVRTRMELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEK
TLAKMVAQGLTEKVTDDKILNFYFPSCGKVPPPVIMVQNVSFRYTDSGPWIYKNLEFGID
LDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMIRKNSHLRIGRYHQHLHELLDLDLSPLE
YMMKEFPEVREREEMRKIIGRYGLTGRQQVCPMRQLSDGQRCRVVFAWLAWQTPHLLLMD
EPTNHLDMETIDALADAINDFDGGMVLVSHDFRLINQVAEEIWICENGTVTKWQGGILKY
KDHLKSKILKDNADNAAKFNRK