New model in OGS2.0 | DPOGS214613  |
---|---|
Genomic Position | scaffold3520:- 5786-8993 |
See gene structure | |
CDS Length | 951 |
Paired RNAseq reads   | 51 |
Single RNAseq reads   | 143 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001706 (3e-10) |
Best Drosophila hit   | CG10543, isoform A (8e-12) |
Best Human hit | PR domain zinc finger protein 5 (3e-10) |
Best NR hit (blastp)   | zinc finger protein, putative [Ixodes scapularis] (1e-13) |
Best NR hit (blastx)   | zinc finger protein, putative [Ixodes scapularis] (2e-16) |
GeneOntology terms    | GO:0005622 intracellular GO:0008270 zinc ion binding |
InterPro families    | IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type |
Orthology group | ND |
Nucleotide sequence:
ATGTATTTGTCCGATTTAATTGAGACATATAATGACACGTGGTTTGAAATGGAACACGAG
GAAAAGGAATCGTTAGTCCTCTATCAGGTTATACCGTTAACATTAAATAATACACAAGAA
AGTGCAGCGGAGACAATTATAAACATTGAGTCTGACGAAGATATGGGTATCACCATCTGT
GAACCAGCTGACCCAGAAACGGGATGTACACAAGATGTTATTGAAATAGAAAGTGAAGGA
ATAGAATGTAAAACAGAAATAACGGAAATAGGAAGTGAAGAAATGGCGGAAATAGGAAAC
GATAAAATAGAAAGCAGTGAAGAAATATTGAAAATAAGAAATGAAGAAATAGTGGAAATA
GGAAATGATAAAATGCAAAATTATGAAGGAATTAGAGAACAGGATGCCAAGAGAAATGTA
GGAAAGAAAATATCAAAAATACCCGCAGATAATAAAAATTATTATACAAAGAAAATAAAC
GATGAAGAAAGAATGAAATTACTTGATGAGAAGAAATCATTGAGTAATTACAAGAACAGG
GTGTTTAAATGTGAGACGTGTGTACCAGGGTTCACAGCTGACGGCTATGAAAAACATATT
AAGAAGTTTCATAGTAAGTCCGCAGATTATGAATGCCATTACTGCGGACGGAGGATGAAA
AGTAAGAGGTCGCTGACATCGCATATACGGAGACATTACAGGAATGTCTCGTGTCCCGTT
TGTAAGAAAGTATATCATAGGACGTGGGCCATGAATGATCATTATAAATTGGTGCATCTA
AGGAAAACTAATTGCTACTGTGGCTCCTGTACCCGGACAAATCGGATTCTATCAAACCAG
CTGAGATCTCACACCGGAGAGAAACCGTGCAACTGTCAAATTTGTAGTTCAGAGTTCACA
CAGAAGTATTCCGTGAAGGTTCACAAGCAGAGTGTACACAAGATACCTTAA
Protein sequence:
MYLSDLIETYNDTWFEMEHEEKESLVLYQVIPLTLNNTQESAAETIINIESDEDMGITIC
EPADPETGCTQDVIEIESEGIECKTEITEIGSEEMAEIGNDKIESSEEILKIRNEEIVEI
GNDKMQNYEGIREQDAKRNVGKKISKIPADNKNYYTKKINDEERMKLLDEKKSLSNYKNR
VFKCETCVPGFTADGYEKHIKKFHSKSADYECHYCGRRMKSKRSLTSHIRRHYRNVSCPV
CKKVYHRTWAMNDHYKLVHLRKTNCYCGSCTRTNRILSNQLRSHTGEKPCNCQICSSEFT
QKYSVKVHKQSVHKIP