| New model in OGS2.0 | DPOGS214614 |
|---|---|
| Genomic Position | scaffold3520:+ 10697-15885 |
| See gene structure | |
| CDS Length | 2571 |
| Paired RNAseq reads | 658 |
| Single RNAseq reads | 3190 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001662 (3e-67) |
| Best Drosophila hit | CG10543, isoform A (1e-07) |
| Best Human hit | zinc finger protein 765 (2e-11) |
| Best NR hit (blastp) | PREDICTED: similar to putative reverse transcriptase [Strongylocentrotus purpuratus] (2e-36) |
| Best NR hit (blastx) | PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpuratus] (2e-40) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR022755 Zinc finger, double-stranded RNA binding IPR007087 Zinc finger, C2H2-type |
| Orthology group | MCL10014 |
Nucleotide sequence:
ATGGATTCTCATTTAATGCATGAGGCGGTCCCTCACAACATAAAGATGGATATGCACGAC
GGTTCGCACAACGTTAAACTTGACCTCCACGAAGTTCCTATATCACACAACATCAAAATG
GACGGTCACGTTCACGAGGTGCCAGTCACACACATAGGTCATATGAACCAAAACAATCAG
TTACAACAGCAAAACGTCACACAAAACGTGGAGACGGAACCGGAGAATCTGCTGAAGCCG
CGAATGGAGAAGAAAAAGAAAGAAGCCATCGACGGACAAGCTAGAGAAATAATTTACAAA
GTTATCAAGTTCTTCGAGAGTGAAAAACAGAATAGAGGTTACGCGTTCCCGGTTGAAAAT
GTAGTTAAAAGGGCCTGTGCGGCCACCGGCCTGTCTGAAAGCACTATAAAGAGGATTAAA
CGGGAAGGTATCAGAGCTGAGGCGACACACACGAAAATGGCTGGCCCAAAGAAGAAGAGA
GTCCGGAAAACTAAAGTCCAACTGGATTATTTCCAACTGTGTGCGCTACGAGGCATTGTT
AACAGCTACAGTATGAGAAAAGAGGTACCTACCTTAGGCAAAATACTAACAGCGGCCAAA
CACGAACTGAATTACAGAGGTGGCAAGGAATCTCTCAGGCTAATATTACTGAACAAGCTA
GGTATTAAGTTTAAGAAGTGCGAAAAGAAAAATAAAAAACCTCCGGAGCCCAATCAGGGG
GCGGCAATTCAGCCGATGCCAAATGTTATGTCACATTTGCCAATGCAGCAAATGAAACCA
GAGAACCAATCTTTCCTTGATATACTTGTTGTTAGGAATCCTGACAATACTTTGGGACAT
ACTGTTTATAGGAAACCCACACATACGGACAGGTACCTCAATGGTTACTCACACCACCAC
CCTATCCAGTTAGCTACCGTTGGCAAATCTTTGTTACAGAGAGCCCAACATCTTTGTGAT
GCTGACCACCTAGAGGCCGAGCTGCAGCATGTAAAACATGCTCTCACTATCAACAACCTG
CCCGTGCCTCGCCAGCATCGCAAGAAGCACCTGAAGCCACCCACAGTTGAACGACAACCT
GCGATACTACCATATGTGAAGGGAGTTACTGACAGAATAGGCAACATCTTGAAGAAGGTT
TCCATTAAAACTATTTACAAACCACATAAGAAAGTGAGCCAATTCTTGAGACCAATCAAG
AGTAACATTCCTTTACAACAAGCGGGTGTATACAAACTCGACTGTGACTGTGTCTTGTCA
TACATTGGACAGACGAAGAGGAGCATCGGTACAAGGGTTAAGGAACACATCTCAGATATC
AAAAACAGGCGCGCGTCGAAGTCAGCAGTGTGTGAACACACAATGGACAAACCAGGCCAC
TACATTCGTTTTGATAAACCTCAAATCCTCGCTCGGGAAGACAAGTATATACCGAGATTA
ATTCGCGAGGCTATTGAAATTAAAAAACATCCCAATTTCAATAGAGAAGATGGCTGGAAT
CTTTCAAACACCTGGGACCCCGTTCTTAAAAATATAAAATCCCATGTCCGTAACCACACC
GCAGGACCTCAAGACACCACACCAGGAAAAACGTTATCACAATTGTCCATAAGCAAAAAT
ATAGATTATGACCTGACATGTACCGAGAATGACAATGATAGCAAAATAAAAATAGAATTA
AACGATTCGGGCAATGATTACAATGAAACGATAGTTAAGGAGGAATTAGATGATACGTTA
AATTATAACGGAATAGGTAATATTGATATCGGGTTGAAGAAAATCAGGAGTGTAAGGAGG
AAGTGCAAGATAAGTGATACTAGATTCACTGATGATGAGAAGGAGAGTCTGGTTGTGCCG
TTTTTGATCAAACTCAATGATGTTTTTGCATTACCCAAGAAGAGGAACGGCGTCCATTAC
AAGAATATGTTGGCGATATGTAGTAAATATATTGGTAATTTGGCCGAAGTTAGGAGAAAT
GATCTTGAAAGAGTTGGGCCAAATCTCGAATGCACGGACTGTGGTGCACAGATCACAGAC
CGGGATATGATGGCGCACTGGGACGAGCACAGAGTACACCTGCACAGATGCAACCTCTGT
GACGTCATCTCCAGGTCAAGGAAGGAGATCATACAGCACATAACAGAAGTGCACACCAAG
GTGTACACCTGCAAGGAATGCGGGATTAAATGCTGGAAATTGCAGGAGTTCAATAAACAT
TACCGGAACTTTCACAAATACTTTGTGTGTGATCATTGTGATAAAAAGTTCTATAGCAAG
TCTGTCATTGAGAGGCATATCAGATGTCGTCACCTCCGCCCCCCGCCGCCGGAGCCCCCG
GAGCAAGCGTACTGTGTGGAGTGCGACCGAGTGTTCCCAAGCCAGCAGATGTACAGGAGA
CACCTGAGGACTGCCGCCGCTCATCGACCGCCTAAAAACACCAAGGTGCCGTGCCCGGAC
TGCGGGAAGACGTTCAGCAGGAAGGTGTACATGAACAATCACCACAAGCAAGTCCACAGG
CGGGACTCGCCGCACTACTGCAGGGACTGTGACAAGGTAAACCTCGCCTGA
Protein sequence:
MDSHLMHEAVPHNIKMDMHDGSHNVKLDLHEVPISHNIKMDGHVHEVPVTHIGHMNQNNQ
LQQQNVTQNVETEPENLLKPRMEKKKKEAIDGQAREIIYKVIKFFESEKQNRGYAFPVEN
VVKRACAATGLSESTIKRIKREGIRAEATHTKMAGPKKKRVRKTKVQLDYFQLCALRGIV
NSYSMRKEVPTLGKILTAAKHELNYRGGKESLRLILLNKLGIKFKKCEKKNKKPPEPNQG
AAIQPMPNVMSHLPMQQMKPENQSFLDILVVRNPDNTLGHTVYRKPTHTDRYLNGYSHHH
PIQLATVGKSLLQRAQHLCDADHLEAELQHVKHALTINNLPVPRQHRKKHLKPPTVERQP
AILPYVKGVTDRIGNILKKVSIKTIYKPHKKVSQFLRPIKSNIPLQQAGVYKLDCDCVLS
YIGQTKRSIGTRVKEHISDIKNRRASKSAVCEHTMDKPGHYIRFDKPQILAREDKYIPRL
IREAIEIKKHPNFNREDGWNLSNTWDPVLKNIKSHVRNHTAGPQDTTPGKTLSQLSISKN
IDYDLTCTENDNDSKIKIELNDSGNDYNETIVKEELDDTLNYNGIGNIDIGLKKIRSVRR
KCKISDTRFTDDEKESLVVPFLIKLNDVFALPKKRNGVHYKNMLAICSKYIGNLAEVRRN
DLERVGPNLECTDCGAQITDRDMMAHWDEHRVHLHRCNLCDVISRSRKEIIQHITEVHTK
VYTCKECGIKCWKLQEFNKHYRNFHKYFVCDHCDKKFYSKSVIERHIRCRHLRPPPPEPP
EQAYCVECDRVFPSQQMYRRHLRTAAAHRPPKNTKVPCPDCGKTFSRKVYMNNHHKQVHR
RDSPHYCRDCDKVNLA