| New model in OGS2.0 | DPOGS203719 |
|---|---|
| Genomic Position | scaffold510:+ 24221-29000 |
| See gene structure | |
| CDS Length | 2619 |
| Paired RNAseq reads | 1612 |
| Single RNAseq reads | 3885 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003505 (0.0) |
| Best Drosophila hit | arc, isoform B (9e-27) |
| Best Human hit | PDZ domain-containing protein 2 (2e-14) |
| Best NR hit (blastp) | pdz domain protein arc, putative [Pediculus humanus corporis] (8e-98) |
| Best NR hit (blastx) | pdz domain protein arc, putative [Pediculus humanus corporis] (6e-102) |
| GeneOntology terms | GO:0005912 adherens junction GO:0048749 compound eye development GO:0016324 apical plasma membrane GO:0005515 protein binding |
| InterPro families | IPR001478 PDZ/DHR/GLGF |
| Orthology group | MCL17565 |
Nucleotide sequence:
ATGCGGTGGTTCAGGAATCGTGAGCCGCCGCGGCTTCTTGCCGTTTCGCCCGAAGAGCCT
CGCTCCACTAGAAGATCTAGAATTGATATGTCACCAGTGCGATATAACAACCGAAAAAGT
AGCACCAGTTCGGTAGAAACCAATTTTTACAATTTGAATGATCAAATTATTATCGTTGAA
AAATCGCCTCATCCATGCCATCGCAGCTGTGAAACTCCAGTAACAAGAAGAATATCTCTC
CAAAATGGACCAGCATCCCCCCAAGAATTACCTTATGATAGCAGTCAAAAAAATAGAGGC
AGCTCTCTGGAAAAAGAATACATGACGTATAGAGAAAAGAGGAATCCATTGCTAGATAAA
GTGAAAAATACTAAACTTTCATGTTTTAGATCTAATGGTCCTATTCGACACGGAGATGAT
GCAGTATCAACATCTGGTAGTGACTGTAGTGGCTTTGGTCATGTCGACGAGGTAACACAT
TGTCGTTACGCTGAAAGTTATTCTGAACATACGGAGTTCGAAAACCATAATCCTTGGGTG
AAAATGTCACACTATGAGGATGATGTATTTTTTGCTAAAACTCCTATTGAATGTAATTGG
CGTGAAGGTAAATCATTTACGAATAGGGGTACGAGATGTTACAGCTCAGGGTCAGAATGT
GACAGATATCATGCAATTCCAAAAGTAGGAGCTAAACTTTCTAAGTCAAGTGATCAAATA
TTTAATGACGACTATGAACCTTATGATTGTACTCCGACGAAACTAGGTAAAAAGACTGAT
AAACAAAAAACTAAGGACGATAAAGATACAATAGGGCCTAGTTCATGTCTATCAGCTAAA
CTTCGAGCAATGTCTGATAGATATCTTAAATCATCTACGAATAGATTTTTTTCAAAGCTA
TATAAACAAAACGACGAAGTAGGTATAAACAGTCTAAACGACAGTGCTATAAAGTCCACA
AGTTCAGCTAGTAGGAGTCGCAAGAAAAGGGGTGGAGTTAAAGCAAAACTCAGAAGTTTT
TCCTATGGAGCATTACCTGGTTTAGATGAGTTTCAAAAGCAAAATTCAGTTTTTCATGAT
GATGTGTATCAAGTCTCTTGCGACGATGAAAATGTTTTGATTCAAGATTGTGAAGATGCT
GATTCAGGTATACTAGTCAACGAATCAGCAGCGTCATCAATATTTGACAGCGATAGAATA
TCACGATGTGAAAGCTCTGCTTCACATACAAACTCTCAGATACAGAGTCACAGTAGAAGT
ATTTCGGGTGATCAAACATATGTTAAGACTCGAATCTCTTATAGAAATCGAAGAGACAAA
AACGATCATCCTAAGCCTAGACCACGCCAAACTCAAAGAGCTTTGTCATTAGATCGTAAG
GAAATCCTAAGGCGTATGCCTAAAAATTCGGAATATGCTGAACCTCAATACCTACAACTG
ACAGAAAAACAAAAAATGCGCCAAAGAGATGCTAGTCTGGAAGATTATGGAATACCCCCA
ATACCTCCATGTCGTAAAGCTACTAAAAACAAGAGTAATAAGCAGCAGTCAGAATTTAAA
GTAGTAAGGATAATTAAAAATAACCCGGGTGACGAGTTGGGCATATTTATTGCTAAAACT
AAACTTTTGGACGAAGGCCATGTGGGATACCTAGTTGCACATGTTGTTGCTGAAGGATTA
GCTGATAAGGAAGGTACTCTTCAAATAGGTGACGAGCTTCTTAATGTAAATGGACGTAGA
CTGCGAGATCTGACTATGTCGGAAGCCAAAGAAGCGTTAAGGTCTGGTTCGGCGGAGATT
GATATAGTTATATGCAGACAGCGACAAAAATCAGAACATGAATCAATACAACGGGAACCT
ACCCAGAGAAATATAGCTTTAATGCGTGAAAGTTCCGTGGATTACGAAAACGCTATAATT
CTAGGAAAAGAGAGATGCAATAATAAATATGACATCAAAGTCGACCTACGTCAAAAGGAA
CCCGCATGTAATCGGCTCTTATCAGGAACGGATGAGGCGGATGGAACGGAGGACACACAG
TCGCGCTTCCTAAAAGGGCAGAGTGCGGGTTATAGCAGTATGAACAACAAGTTATTGCGA
CGGCAAGTTGTCAGTTATGGTGGTGCTAATAAAGATGCGCTTGTTCTTAGTTGTGCAGGT
GATATAGTGGATGTGGATGTGCCAGATGGGACCACTGAGAGGACAGATAAACATGAAGAT
AATATGCAGACTCAGAATACCGCAAATTTCTGCACACTCCCAAGAAAACCAAGGGCGCCA
ACACACACTTACCATACGATCGTGTTTGAGAAGGGTCATGGAAAGAAGCCCTTAGGATTT
ACGATAGTTGGTGGACGGGATTCGCCTCGGGGTCCCTTGGGAATTTTCATAAAAAGTATT
CTACCACAGGGACAGGCGATAGACGACGGAAGATTGAACGCTGGTGACGAAGTTTTAGCA
GTGAACGGTCAGGCGTGTCATGAATTAGCCCACGTGGAAGCTCTGGCCCTCTTCAAAGCA
GTTCGAAGTGGGACCATCGAGCTAAGAGTTTGCCGCAGAATTAAAAACCAATCTACCAAA
GCAAAATCGTGCACAGATCTACTGAATGACGACGATTGA
Protein sequence:
MRWFRNREPPRLLAVSPEEPRSTRRSRIDMSPVRYNNRKSSTSSVETNFYNLNDQIIIVE
KSPHPCHRSCETPVTRRISLQNGPASPQELPYDSSQKNRGSSLEKEYMTYREKRNPLLDK
VKNTKLSCFRSNGPIRHGDDAVSTSGSDCSGFGHVDEVTHCRYAESYSEHTEFENHNPWV
KMSHYEDDVFFAKTPIECNWREGKSFTNRGTRCYSSGSECDRYHAIPKVGAKLSKSSDQI
FNDDYEPYDCTPTKLGKKTDKQKTKDDKDTIGPSSCLSAKLRAMSDRYLKSSTNRFFSKL
YKQNDEVGINSLNDSAIKSTSSASRSRKKRGGVKAKLRSFSYGALPGLDEFQKQNSVFHD
DVYQVSCDDENVLIQDCEDADSGILVNESAASSIFDSDRISRCESSASHTNSQIQSHSRS
ISGDQTYVKTRISYRNRRDKNDHPKPRPRQTQRALSLDRKEILRRMPKNSEYAEPQYLQL
TEKQKMRQRDASLEDYGIPPIPPCRKATKNKSNKQQSEFKVVRIIKNNPGDELGIFIAKT
KLLDEGHVGYLVAHVVAEGLADKEGTLQIGDELLNVNGRRLRDLTMSEAKEALRSGSAEI
DIVICRQRQKSEHESIQREPTQRNIALMRESSVDYENAIILGKERCNNKYDIKVDLRQKE
PACNRLLSGTDEADGTEDTQSRFLKGQSAGYSSMNNKLLRRQVVSYGGANKDALVLSCAG
DIVDVDVPDGTTERTDKHEDNMQTQNTANFCTLPRKPRAPTHTYHTIVFEKGHGKKPLGF
TIVGGRDSPRGPLGIFIKSILPQGQAIDDGRLNAGDEVLAVNGQACHELAHVEALALFKA
VRSGTIELRVCRRIKNQSTKAKSCTDLLNDDD