New model in OGS2.0 | DPOGS202988  |
---|---|
Genomic Position | scaffold8:- 327446-332755 |
See gene structure | |
CDS Length | 1098 |
Paired RNAseq reads   | 3344 |
Single RNAseq reads   | 9441 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012333 (3e-106) |
Best Drosophila hit   | CG14688 (1e-84) |
Best Human hit | phytanoyl-CoA dioxygenase domain-containing protein 1 isoform a (2e-60) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP003514-PA [Tribolium castaneum] (8e-96) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP003514-PA [Tribolium castaneum] (2e-94) |
GeneOntology terms    | GO:0046872 metal ion binding GO:0016491 oxidoreductase activity GO:0055114 oxidation reduction GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
InterPro families   | IPR008775 Phytanoyl-CoA dioxygenase |
Orthology group | MCL12580 |
Nucleotide sequence:
ATGGGAATTTTCTGGCCGTTCGTCACAGATGGTGCGGAACGCTCCCGTGCCGCGTCATCG
ACAAGCGCACGCGCAAGTGACCGAGCTCCGATATTATCTCGTGACTTCATATCCAACGCT
CGCCCAAAACGCACTCACACTCACCGTCCCGGTTGTAAGCTTGTAAAGTCAGTGCTCAGT
TGTGTTTTGACTGTTGTTGGGGTCGGTCGTTTAATTCGTAACAAAATGTGTACAACAATT
CGGAAACAGTTAGATCGTGATGGTTACGTGGTACTGGAGGACTTCCTCCGTCCGGCGGAA
TGCGACGAGCTGGTGGCTGCTGGCATAGATCTCACCAAACAGTCCCAGGACACATCACAC
AAAGCCATATTCTCAACCACCGAAAATAACAAACAGCAACTAAAGGACGACTACTTCATG
GAGAGTAACGACAAAATAAGATTTTTCCATGAAGTCGATGCCTTCGGTCCCGACGGAGAG
CTTCAAGTGGATCCGGCAGTTTCATTAAATAAGGTTGGTCACGCGTTACATCTCCTCCAT
CCCATATTCAGATGCTACACCTACAGCGGTAGAGTGAAAACTGTATGCAAAGAACTAGGC
TTCCAAGATCCAGCGGTCGTCCAGAGCATGTACATTTACAAGAATCCAGGTTTAGGAGGA
GAAGTGATTGCCCATCAAGATGCCACATACCTTTACAGTGAGCCAACACCAGCTGTGGGC
TTTTGGATAGCTCTGCAGGACGCGACCGTACAGAACGGCTGCCTCTGGATGGCCAGCGGT
TCCCACAAATCTGGAGTCCACCGGCGACTTCTTCGGAAAAACAACGACGAATCGAAACCG
TCCCTTGAGTACGACAGACCAGCGCCTTTCTACCCTGAATCAAGTTTCACACCCGTGCCA
GTCAGTAAAGGCACCTGCATCCTAATACACGGGCTCGTGGTACACAAGAGTGCCCACAAT
AAATCCGATCAAAGTCGCCACGCCTACACCTTCCACGTGGTAGAGAGACACAACAACAAA
TATTCCGAAGAGAACTGGCTTCAAGAGGGAGAGAACGCGCCCTTCGTCAACGTTTACACG
ACGCCACAGATTGTTTAA
Protein sequence:
MGIFWPFVTDGAERSRAASSTSARASDRAPILSRDFISNARPKRTHTHRPGCKLVKSVLS
CVLTVVGVGRLIRNKMCTTIRKQLDRDGYVVLEDFLRPAECDELVAAGIDLTKQSQDTSH
KAIFSTTENNKQQLKDDYFMESNDKIRFFHEVDAFGPDGELQVDPAVSLNKVGHALHLLH
PIFRCYTYSGRVKTVCKELGFQDPAVVQSMYIYKNPGLGGEVIAHQDATYLYSEPTPAVG
FWIALQDATVQNGCLWMASGSHKSGVHRRLLRKNNDESKPSLEYDRPAPFYPESSFTPVP
VSKGTCILIHGLVVHKSAHNKSDQSRHAYTFHVVERHNNKYSEENWLQEGENAPFVNVYT
TPQIV