New model in OGS2.0 | DPOGS203006  |
---|---|
Genomic Position | scaffold8:+ 84371-88784 |
See gene structure | |
CDS Length | 588 |
Paired RNAseq reads   | 357 |
Single RNAseq reads   | 1610 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003865 (2e-48) |
Best Drosophila hit   | pumpless (1e-35) |
Best Human hit | glycine cleavage system H protein, mitochondrial precursor (1e-37) |
Best NR hit (blastp)   | glycine cleavage system h protein [Culex quinquefasciatus] (9e-44) |
Best NR hit (blastx)   | glycine cleavage system h protein [Culex quinquefasciatus] (1e-42) |
GeneOntology terms    | GO:0019464 glycine decarboxylation via glycine cleavage system GO:0006546 glycine catabolic process GO:0005739 mitochondrion GO:0004047 aminomethyltransferase activity GO:0005960 glycine cleavage complex |
InterPro families    | IPR002930 Glycine cleavage H-protein IPR011053 Single hybrid motif IPR017453 Glycine cleavage H-protein, subgroup IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site |
Orthology group | MCL12222 |
Nucleotide sequence:
ATGAAAGACTGTAAGGGCTCCGTTTTCACTGCGACAATTGAAACATTTGTTTTAACTAGC
GGCCGGCTACACAAAGCGTTCGTGCCTGGCCCGAAGGAGACGCGTCTGCGCGAGGAATCA
AGAACAATGGTGTTAGGAAAATTACTACGGTCCACGGCGCGTTTTGCTGGAGCGACACAA
TGCTGTGGCCGGGCCGTTTACAGTACTCAAGTTAAAGGAAGACTCTATACAAAGAAACAC
GAGTGGGTGTCTTTGGACGGCGGCGTAGGCACCGTTGGCATTTCTAATTATGCACAGGAT
GCTCTCGGGGAGGTTGTATTTGTGCAGTTGCCGGAGGTAGGTCGGACAGTAGCTGCTGCT
GAGGAAGTCGGTGCTTTGGAGAGTGTCAAAGCTGCCAGTGAGGTCTACTCTCCTATATCA
GGGACTATAACTGAGAAGAATGACGCGGTGGAGAGCAGTCCGTCCCTCATCAACAAGTCT
TGTTATGAAGATGGCTGGCTGTTCAAGGTCTCGCTGAGCAAGCCAGATGAACTGGAGTCG
CTCATGGACCAGCAGACCTACGACAAGTACCTCGAGGATTCACACTGA
Protein sequence:
MKDCKGSVFTATIETFVLTSGRLHKAFVPGPKETRLREESRTMVLGKLLRSTARFAGATQ
CCGRAVYSTQVKGRLYTKKHEWVSLDGGVGTVGISNYAQDALGEVVFVQLPEVGRTVAAA
EEVGALESVKAASEVYSPISGTITEKNDAVESSPSLINKSCYEDGWLFKVSLSKPDELES
LMDQQTYDKYLEDSH