| New model in OGS2.0 | DPOGS203011 |
|---|---|
| Genomic Position | scaffold8:+ 170149-198112 |
| See gene structure | |
| CDS Length | 2307 |
| Paired RNAseq reads | 1394 |
| Single RNAseq reads | 3327 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003870 (0.0) |
| Best Drosophila hit | cycle (2e-109) |
| Best Human hit | aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform a (3e-106) |
| Best NR hit (blastp) | cycle [Danaus plexippus] (0.0) |
| Best NR hit (blastx) | cycle [Danaus plexippus] (0.0) |
| GeneOntology terms | GO:0003704 specific RNA polymerase II transcription factor activity GO:0005634 nucleus GO:0007623 circadian rhythm GO:0048148 behavioral response to cocaine GO:0008062 eclosion rhythm GO:0045475 locomotor rhythm GO:0045187 regulation of circadian sleep/wake cycle, sleep GO:0045893 positive regulation of transcription, DNA-dependent GO:0007622 rhythmic behavior GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0003702 RNA polymerase II transcription factor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0007165 signal transduction GO:0004871 signal transducer activity GO:0046982 protein heterodimerization activity GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0003677 DNA binding GO:0032922 circadian regulation of gene expression GO:0042594 response to starvation |
| InterPro families | IPR001067 Nuclear translocator IPR001092 Helix-loop-helix DNA-binding domain IPR000014 PAS IPR011598 Helix-loop-helix DNA-binding IPR013655 PAS fold-3 IPR013767 PAS fold |
| Orthology group | MCL13274 |
Nucleotide sequence:
ATGCTATGTGATTTGAGTGAGCTGCTCTGTTTGCAGGTAAAGAAGCCGGGCGCAGAGGCC
GCAGCCTTGCGCCATGACGCGTTACGGACATGGCAGTTTGGGGGGCTGAAGCCGGAGCGA
TTCCGGCCGCTCGCTGCGTTCCTTTATCCGTCAGTGAAGGCCTGCGGGCGAGCCGACTCG
GTCGCCATGGCACGCGAGTACACTCGTCTTCATGACTTCTACTTACAGATGCACGATCTC
CAGCCGCCGGCCCCTCACTACTATTCTTACGACTTTAACGGGTCGAACGCGAGCTCGACG
TCGTACGAGTTGACGGTGGGGGCGGGAGCGGGAGCGGGACCGGGAGCGTGCGACGACATG
GCCGGAGCGGGAGCGGTTCTCAGCTTACAACCACACGCGCCCCACAACCCACCACCAGAC
CCACGGAAGAGGAAGAACCAGCAATATTGCAGTTCGGATGGTTACGGGCTGGTTTGCGAG
GTACCGATGTCTGGACATGCCGCTGTCGTGCCGCAGATCGCGACTACCAACAGGAAACGG
AAACCGTCATCCTACGGCACGGCCAGCGCTTATGACGATGACGGCTCCGAAGACACGCGC
TCGAGAAGCACCGTACCAGATAAGAGGCAGAACCACAGCGAGATCGAGAAACGGCGCCGC
GACAAAATGAATACTTACATATCAGAGTTGAGCTCCATGGTGCCCATGTGCGGCGCCATG
GCTAGGAAGCTGGATAAGCTGACGGTCTTACGCATGGCGGTGCAGCATCTGCGCTCGGTG
AGGGGAGCCCTGTCGGCCGGCCCGCTGACGGTCAGGCCGCGCCCAGCTTTCCTGTCAGAG
ACGGAACTGAACGCGTTGGTACTCCAAGCTGCCAGGGATTGCTTCCTGATGGTTGTCGGC
TGCGATCGAGGCCGTCTCCTCTACGTTTCCGCTTCCGTCTCAAGAATGCTGAACTATGAT
CAGTCGGAGCTGATAGGTCAGAGCCTTTTCGATATGCTGCATCCAAAAGACGTCGGCAAG
GTGAAGGAGCAGCTCTCATCATCCGACCTCAGTCCGCGAGAAAGACTAATCGATGCTAAA
ACCATGCTGCCGTTGAAGCCGGATGTCGTTGCCGATGCGTCTCGACTGTGTCCGGGAGCA
CGGCGCTCGTTCTTCTGCCGCATCAAGTGCCGTACTGAGCCTAGCCAGGCCAGCCAGAGC
AGCCAGTCTAGCCAGGGCTGCCAGCCGTGCACAAACACCCAGCCCAGCGAGGTCAAGGAG
GAGGAGCCCAACTCCAAGATGAAGAAAAAACAGGCGCATGAGAAGAAATACTGCGTTGTT
CAATGCACAGGGTACCTGAAGTCCTGGGCCCCGGCTGAGATGTCTGACGGATGCTGCACG
GACGCCGGGTCTGAAGAGGAATCCTGCAATCTGTCGTGTCTGGTGGCTGTGGGGAGGGCA
CTGGCTGATCTCGCCCAGCATCCCGACTCCGCCCCACAAACGAGATATCTTCAGTACATC
TCCAGACACGCCCCTGATGGGAAATTCCTGTTCGTTGATCAGAGGGTAACTATAGCTCTC
GGCTTTCTGCCTCAAGAGCTTCTGGGCACGAGCATGTACGAGTATATTTTGGCCCCGGAA
TTGGGGTCCGTGGCTAGGATCCACAAAGCGGCGTTACTGAGACGCGACTCCCTCAGGACC
CCTCCCTACTGTTTCAGGAAAAAAGACGGCACATACGTCAGAATACAGACCCATTTCAAA
CCCTTCAAGAATCCGTGGACCAAGGATGTAGAAAGCCTTGTCGCCAACAACACCGTGGTG
GTAGGGAACAGGGTCCAACCACCGCCGGAGGATTGCTCCCAATATGACATTTACAAAATA
AATGACATGGACCGACCCCTGTCAGAAGCTGACGTTGAGATGCAGAGACTGATAGACTCC
CAAGTTGAGTCCCACAAGATCGGCTCTACCATCGCTGAAGAAGCTCTGAGGAGGTCCTCC
TCCGATTTCTCAGATCTGACTTCCGACCTGCTCCAAGACGCCGTCTTCAGTCAACAGTCG
TCGCTCGTGGACAATATCCTCGGCGGGGAGGTGAACTACTCCAACCAGGTTCGCAACAAC
GTCCCCCTGAGCGCTGCCGGCGGCAGTTCGCCATCACCGGAAGCCGAGCTGCCACTCAGC
CCCTTACCAGTGTCTCCCCCCCTCCCCCCTCTCGGATTAGACGGCAATGGTGAGGCTGCT
ATGGCCGTCATCATGAGCCTGCTAGAAGCCGACGCTGGTCTTGGAGGACCGGTCAATATC
TCTGGACTCCCATGGCCCCTACCTTAG
Protein sequence:
MLCDLSELLCLQVKKPGAEAAALRHDALRTWQFGGLKPERFRPLAAFLYPSVKACGRADS
VAMAREYTRLHDFYLQMHDLQPPAPHYYSYDFNGSNASSTSYELTVGAGAGAGPGACDDM
AGAGAVLSLQPHAPHNPPPDPRKRKNQQYCSSDGYGLVCEVPMSGHAAVVPQIATTNRKR
KPSSYGTASAYDDDGSEDTRSRSTVPDKRQNHSEIEKRRRDKMNTYISELSSMVPMCGAM
ARKLDKLTVLRMAVQHLRSVRGALSAGPLTVRPRPAFLSETELNALVLQAARDCFLMVVG
CDRGRLLYVSASVSRMLNYDQSELIGQSLFDMLHPKDVGKVKEQLSSSDLSPRERLIDAK
TMLPLKPDVVADASRLCPGARRSFFCRIKCRTEPSQASQSSQSSQGCQPCTNTQPSEVKE
EEPNSKMKKKQAHEKKYCVVQCTGYLKSWAPAEMSDGCCTDAGSEEESCNLSCLVAVGRA
LADLAQHPDSAPQTRYLQYISRHAPDGKFLFVDQRVTIALGFLPQELLGTSMYEYILAPE
LGSVARIHKAALLRRDSLRTPPYCFRKKDGTYVRIQTHFKPFKNPWTKDVESLVANNTVV
VGNRVQPPPEDCSQYDIYKINDMDRPLSEADVEMQRLIDSQVESHKIGSTIAEEALRRSS
SDFSDLTSDLLQDAVFSQQSSLVDNILGGEVNYSNQVRNNVPLSAAGGSSPSPEAELPLS
PLPVSPPLPPLGLDGNGEAAMAVIMSLLEADAGLGGPVNISGLPWPLP