| New model in OGS2.0 | DPOGS203023 |
|---|---|
| Genomic Position | scaffold8:+ 474224-487378 |
| See gene structure | |
| CDS Length | 3105 |
| Paired RNAseq reads | 1602 |
| Single RNAseq reads | 5106 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012260 (1e-108) |
| Best Drosophila hit | alhambra, isoform A (1e-106) |
| Best Human hit | protein AF-10 isoform a (3e-86) |
| Best NR hit (blastp) | alhambra, isoform A [Drosophila melanogaster] (7e-116) |
| Best NR hit (blastx) | GH18590 [Drosophila grimshawi] (2e-108) |
| GeneOntology terms | GO:0046872 metal ion binding GO:0005634 nucleus GO:0008270 zinc ion binding GO:0005515 protein binding |
| InterPro families | IPR001965 Zinc finger, PHD-type IPR011011 Zinc finger, FYVE/PHD-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR019787 Zinc finger, PHD-finger IPR019786 Zinc finger, PHD-type, conserved site |
| Orthology group | MCL15754 |
Nucleotide sequence:
ATGACATGCTTAGTCCAAACTGACTTGAATGTTGGAGGGAGCTTCAGTAAGATTCTGTCT
GATATCATGGAAGTAGTGCATGGGATACATTATCGCTTCTTCATTCATTTCATACTTTGG
GTGGTGTGCAATAATGCTTCCTTCAATATGAAGGAGATTATGAAGGAGATGGTTGGTGGT
TGCTGTGTGTGTTCCGACGAGCGTGGTTGGCCTGACAACCCGCTGGTCTACTGCGACGGC
AATGGATGTTCGGTTGCAGTACACCAAGCCTGCTATGGAATCATTGCTGTTCCGACCGGT
CCCTGGTACTGCAGGAAGTGTGAGAGCCCTGAGACTAAAAGCAAAGTGAGATGCGAGCTG
TGCCCGTCTAAGTTGGGTGCGTTGAAGCGTACTGACACAGGTGGCTGGGCCCACGTCGTA
TGCGCTCTCTACATACCAGAGGTGCGTTTCGGGAACGTGACTTCTATGGAGCCGATTGTC
CTGCGACTCATTCCCACCGAGAGATATAATAAGACTTGCTACATCTGCCAGGATCTTGGC
AAAACTCATCGCGCCAACGCAGGCGCCTGCATGCAATGCAACAAATCTGGTTGTAAACAG
CAGTTCCACGTGACCTGCGCCCAGTCCCTCGGCCTGTTGTGCGAGGAGGCCGGCAACTAC
CTGGACAACGTGAAATACTGCGGTTACTGCCAACATCACTACAGCAAACTGAAAAAAGGC
GGTAACGTGAAGACCATCCCGCCGTACAAGCCGGTCAGTCACGATAGCCGCAGCGACTCG
AGCGAGAGGGAGGGGGAGCCGCCGACGACGCACTGCAAGCGAGGGCCCGGCCGGAAGTCG
TCTCACTCCAGCGGCGGCGCGTCCGGGAAGAACACGCCCAACTCGTCCAAGACGCCTACG
AACACATCCCAACCGATGGACAAGAAGAAGCCTTCACCGTCTCGTCGAGGATCTGTGGCT
GAGAGCGGCAGCAAGACCAATACACCAGCCCCCTCACCCTCGCCGCAACACATACAGGAG
ACACACACTAAAGGAGGTTGTTCTACGCCCATCAACACCGCTAAGATCCCCTTGCCGCCG
GAGTCTCCTGGCAAGGAAGGCATGATCAGCTCAGCGGCCATAGCATCTATACCCATACCC
CCGAGCACTTCAACAACGACTGTCGTGCAACCTACCAAGCCGTACGAGTCCGTCATCACC
AACACGGAGACGGCTGATGCTAAACAGACCAAGAAAAGGAAGGCTGTTCAAGGTTCGCAG
TCGGCCGTGGACTATGCATCATCACCGACGCCCGTGGAGGTCGCGAACCAGATCGGGAAC
AACACTTGGGAACAACAGACCAGCCACGCAACTAGCGACACTAATGTGGAAGTAGAGAAG
ATTATTAAAAAGGCTAAAACTGAAGGTATGGACGGCGGGTCATCGTCAGCTGGTCACTAC
ACCAGCGTGAGCCCGGCTCCGCCGCCGCCGCCGCCGCCCGCCCACAGCCCGGCGTCACAC
ACCTCGTTACAGAGCCCTAGACATCTCCCCAGTCCGATGCCAGGGCCGAGCGGGATCAAC
CAGGCTCCCAACATCAGATCGCCTTCGCAGCACCAGATGAAGGAGCGCGAGCCGCCGGCG
TCGCTGCTGGTCTCCGTGCCGCTGCCTTCAGCCAGCCACGGCCTGAACCTGTCCGCGCAC
GCGCACGCCCTCATGCACGCACAGATCCCGCTGCCGTCTCCAATGCCAGAGATGGGGCAT
ATCTTCCATCAGACCCACAAGCAGGTGGCGATGGAGTCGGGGCTGAGTCACTCACCCCAC
GCTCGGTCCTGGGGCGGTCTGAACGTCTCCTACGAACTACAGGATCCAAACAAACCCGGT
GTGAGCGGTATAGCTGGGCCCAGCAAGGAGGCGCTCGTCGGCGCCAACATGGCCAATATG
GCCAATATGGCCAACATGGCTAATATGGCGAACATGGCAAACATGGCGAATATGGGCATA
CCGCCAGCCTTACGGAACAAGAAGAGAGCAGCACTAGCCACGTCCACGGCGAACACCCCG
CCGCCACCGCCGATGCAGTCAACCGCAGCTCAGAACCTGAGCGGGATGCGGAGGGGACCC
CAGCCGACCCCGCCGCCCGTGTATCACGAGGCAATCAAAGACTCTCCTCCGAGCTCGCCC
GGCTCCGAGAGACCGCTGAAACCTAAATTGGAACACAAGTTGGGTGTGAACTGCTCGGCT
CCTCATATGCTCGGTAACGAGCTGAACCCGGAGAGCGGAGCGGCGGCTCGTCTCCAGGAG
CAGCTGACGGCCGAGCTGGCTGCCCACGCGGCCGGCGCCGTCAATTCAGCTGACACGCCC
ATACCGCCGCCCCTCATCAACAAGGCCGCTCCGAGATCCGGTGCTCAAAGCCTGGATCAG
CTCCTCGAGCGACAATGGGAACAGGGCTCGCAGTTCCTCATGGAACAAGCACAGCACTTC
GACATAGCGTCGCTGTTGTCCTGCCTGCACCAGCTGCGGACGGAGAACGTCCGCCTGGAG
GAGCACGTCGGCAATCTCCTGCAGAGGAGGGACCACCTGCTGGCCGTGAACGCACGCCTC
GCTATACCACTAGCTGTGGTGAGTGGACCCGGCGAGCCAGTCAGATGCGCTCGCGAGAAC
GGATCAGGCCTGAGGGCTCCTTCCGTCCCGGGACGACCAGCTGACAATGTAGCCTGCGAT
CGACATCAGGTAATGATAACAAATATACCTCTATATATAATAACGTACGGCGGGGGGGGG
TCCGTCAGCCGGCGAGGCGGCGAGTACGGCGACCTGGCCGACACCGACATGGTCGACGTG
GAGAATGTGAGCGATATGGACTATGTGGACCGTGCTTACCGGCCGGGTGGTGGGGTGCTG
GGGCCGGGAGAGGTGAGGTGGGCTCACGGATACGCCCTGCCCGGGGAGCCCGGCCCGAGC
GGGCTGGCGGCGGGCGCTGTAGTCCCCGCGGCGGGGCGACTCGGCGGCCCCGACGAGAAC
GGACACGGAGCCCTGCGGACGGTCAGGGCCTTCATAGTACTGGAGCAGCGAAGGCGAGCC
AGGAGCGACTTCTCCATCGACGCCATACTGGCGGCTGACTACTGA
Protein sequence:
MTCLVQTDLNVGGSFSKILSDIMEVVHGIHYRFFIHFILWVVCNNASFNMKEIMKEMVGG
CCVCSDERGWPDNPLVYCDGNGCSVAVHQACYGIIAVPTGPWYCRKCESPETKSKVRCEL
CPSKLGALKRTDTGGWAHVVCALYIPEVRFGNVTSMEPIVLRLIPTERYNKTCYICQDLG
KTHRANAGACMQCNKSGCKQQFHVTCAQSLGLLCEEAGNYLDNVKYCGYCQHHYSKLKKG
GNVKTIPPYKPVSHDSRSDSSEREGEPPTTHCKRGPGRKSSHSSGGASGKNTPNSSKTPT
NTSQPMDKKKPSPSRRGSVAESGSKTNTPAPSPSPQHIQETHTKGGCSTPINTAKIPLPP
ESPGKEGMISSAAIASIPIPPSTSTTTVVQPTKPYESVITNTETADAKQTKKRKAVQGSQ
SAVDYASSPTPVEVANQIGNNTWEQQTSHATSDTNVEVEKIIKKAKTEGMDGGSSSAGHY
TSVSPAPPPPPPPAHSPASHTSLQSPRHLPSPMPGPSGINQAPNIRSPSQHQMKEREPPA
SLLVSVPLPSASHGLNLSAHAHALMHAQIPLPSPMPEMGHIFHQTHKQVAMESGLSHSPH
ARSWGGLNVSYELQDPNKPGVSGIAGPSKEALVGANMANMANMANMANMANMANMANMGI
PPALRNKKRAALATSTANTPPPPPMQSTAAQNLSGMRRGPQPTPPPVYHEAIKDSPPSSP
GSERPLKPKLEHKLGVNCSAPHMLGNELNPESGAAARLQEQLTAELAAHAAGAVNSADTP
IPPPLINKAAPRSGAQSLDQLLERQWEQGSQFLMEQAQHFDIASLLSCLHQLRTENVRLE
EHVGNLLQRRDHLLAVNARLAIPLAVVSGPGEPVRCARENGSGLRAPSVPGRPADNVACD
RHQVMITNIPLYIITYGGGGSVSRRGGEYGDLADTDMVDVENVSDMDYVDRAYRPGGGVL
GPGEVRWAHGYALPGEPGPSGLAAGAVVPAAGRLGGPDENGHGALRTVRAFIVLEQRRRA
RSDFSIDAILAADY