Genomic Position | scaffold1223:- 19914-21407 |
---|---|
See gene structure | |
CDS Length | 1332 |
Paired RNAseq reads   | 405 |
Single RNAseq reads   | 1642 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005610 (1e-12) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (3e-173) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (2e-173) |
GeneOntology terms    | GO:0003964 RNA-directed DNA polymerase activity GO:0003723 RNA binding GO:0006278 RNA-dependent DNA replication |
InterPro families   | ND |
Orthology group | MCL10012 |
Nucleotide sequence:
ATGGTTGCAAAAGTTTATGGACTGGGTACGGCTAGGGCGTCGCCGATAAACGACGCGCAG
GCACATCGCCCTACACCTGCGATAAGTGGGCAAGGGCTACCGTGTCAAGTACGGGCACGG
CTAAAGACGTTAGTACCCCAAAGGAAACTCCGCTTTGCAACGTGGAATATTGGCTCTCTA
ACCGGACGATGCAGAGAACTCGCAGATGTACTCATGAGACGTCGGGTCCAGTGTGCGTTC
TTCCAAAAGACTCCACAGCACCTTATCACGTATAAGAGCGGGTCCCATTCAACCCAAATA
GATTATCTGCTGACCAGACGGTGTCATATCAGCAAGGTGACTAACTGTAAAGTCATTCCT
GGTGAAAGCCTGACGGCCCAACATCGACTTCTTGTCATGGACTATGTCGTTACCCCGAAA
AAGAAAGTGGCCGAGAAACGTAAGCCTCGCATCAGGTGGTGGTTGCTGAATGGAACGATG
CAGACCAGCTTTCGGGCAGAGGTTGAGAGTCAAAATCTGTCGACTAATACCGAAACTGCT
CAGGAAGTTTGGGATCGAGCCCAGTCAGCAATTATCACAGCAGGTAAACGAGTTCTAGGC
CTTTCTAAGGGAGGACGGGTCATTGACAAGGAGACATGGTGGTGGAATGACGAAGTGCAG
GAGGGGCAGAAGCTCATTTACAAATTGGCACGAGCTCGGGATAAGGCGACGCAAGATATC
GCAAAATGTCTTAGCGTCAAAGATTCCCAAGGCACGTTGCTGTGTAATCATGCCTCTGTG
AAGGAGAGATGGAGATGCTACTTCAAGGAGTTGCTAAATACTCAGCACCCGTGCAGTCTT
CCAACCGAAATACCTCCTAATCTTGGACTTATTGCCCCGATAACACCTGACGAAACTCGG
AATTGTCTTCGACGCATGAAGAATCGGAAAGCGGTGGGACCTGACGATATTCCGATCGAA
GCGTGGAAATCATTGGGCTCTCTTGGTGTGCTCATACTGACGGACCTTTTTAACCGCGTC
TTGAACACTGGGACTATGCCACATCAGTGGCGTTATAGTTACATTACCCCTATATACAAA
GGCAGGGGCAGTGTTCAAGATTGTGGTAGTTATAGGGGCGTTAAGATCATGAGTCACACC
ATGAAGCTCTTTGAGCGTATGATCGACCTCAGGCTCCGCCGAGAGTGTACTGTCTCGGAA
TGTCAATATGGATTTCAGCCAGGATCGGGCACCTTGGACGCCATCTTTGCCATCAGAACT
CTGATGGAGGCATACAGGGAAAAAAAGGAGAGCTCTGCATGTCGCATTCCTAGATCTGCA
GAAGGCCTTTGA
Protein sequence:
MVAKVYGLGTARASPINDAQAHRPTPAISGQGLPCQVRARLKTLVPQRKLRFATWNIGSL
TGRCRELADVLMRRRVQCAFFQKTPQHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIP
GESLTAQHRLLVMDYVVTPKKKVAEKRKPRIRWWLLNGTMQTSFRAEVESQNLSTNTETA
QEVWDRAQSAIITAGKRVLGLSKGGRVIDKETWWWNDEVQEGQKLIYKLARARDKATQDI
AKCLSVKDSQGTLLCNHASVKERWRCYFKELLNTQHPCSLPTEIPPNLGLIAPITPDETR
NCLRRMKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYK
GRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRT
LMEAYREKKESSACRIPRSAEGL