New model in OGS2.0 | DPOGS215443  |
---|---|
Genomic Position | scaffold939:+ 3091-3540 |
See gene structure | |
CDS Length | 450 |
Paired RNAseq reads   | 16 |
Single RNAseq reads   | 46 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004541 (1e-19) |
Best Drosophila hit   | lethal (2) essential for life, isoform A (5e-14) |
Best Human hit | heat shock protein beta-1 (2e-13) |
Best NR hit (blastp)   | heat shock protein 20.4 [Bombyx mori] (1e-18) |
Best NR hit (blastx)   | 19.8 kDa small heat shock protein [Choristoneura fumiferana] (8e-17) |
GeneOntology terms   | GO:0042803 protein homodimerization activity |
InterPro families    | IPR001436 Alpha crystallin/Heat shock protein IPR008978 HSP20-like chaperone IPR002068 Heat shock protein Hsp20 |
Orthology group | ND |
Nucleotide sequence:
ATGATTTTGAGCCCTCTTCTAAACGTTAGTCTGCGCCCACAATTGTGTTCGTGGGTGAAG
CAAACGAGAAATTTAAGACCAATCATAAAAATAGGCAAAGAGAGATTTCAGTTGTTCCTA
GATGTTCATCAGTTTAACAAGGACGAAATAAGAGTTAAGGCGAGATCCGAATTCGTTATC
GTGGAAGGCAAACAAGAAAGGAAAACCAAAAACGGTTGTCTGATACGGACTTTTGTGAGA
AGATTCAAGTTACCAGAAGGTTGTAACCCTCAAGATATAAAATCGAAGCTATCTCCAGAC
GGTTGCTTAATGATCACAGCTCCTAGAAATAAGTGCAGTGTGAACTATCCTTGTGAAACT
GTAATACCTATTGCTTCTACTTCAAAAGAATCCGATGTTTTTAAGGAAGATAAGCCTAGT
GGTTCATCGAAGCCACCAGAAAGTAAATAA
Protein sequence:
MILSPLLNVSLRPQLCSWVKQTRNLRPIIKIGKERFQLFLDVHQFNKDEIRVKARSEFVI
VEGKQERKTKNGCLIRTFVRRFKLPEGCNPQDIKSKLSPDGCLMITAPRNKCSVNYPCET
VIPIASTSKESDVFKEDKPSGSSKPPESK