| New model in OGS2.0 | DPOGS204512 |
|---|---|
| Genomic Position | scaffold1339:- 198-8965 |
| See gene structure | |
| CDS Length | 2778 |
| Paired RNAseq reads | 1747 |
| Single RNAseq reads | 4382 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012514 (9e-60) |
| Best Drosophila hit | CG7261 (4e-156) |
| Best Human hit | tubulin-specific chaperone D (4e-155) |
| Best NR hit (blastp) | PREDICTED: similar to beta-tubulin cofactor D [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to beta-tubulin cofactor D [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005488 binding |
| InterPro families | IPR011989 Armadillo-like helical IPR016024 Armadillo-type fold IPR022577 Tubulin-specific chaperone D, C-terminal |
| Orthology group | MCL12194 |
Nucleotide sequence:
ATGGTGGCCCTCGATGGAGACATAAATAAGGACGACGACTGTGAAAATATTGGACTTGGA
TGCGCTCTAGAACACTTTTCCGAAGTCGAAGATGTACTGAATATGATAGAAAATGTGAAA
AATATTTATAACACACCAACATTCGAAGTCGAATATGACAAATTGTACACAATTTTGAAA
CAGTATTATGAACAACCGCATTTACTTGATCCACATTTGGATAAACTACTCGCGAAATTT
ATGTCTATTATTAAGGATAAGGAAAGCCCGATTGAGTTAAAAAATGCAACATTTAATTAC
ATGTATCAAATTATTCGAGTGAGGGGCTACAAGGTGGTTGTGAGACATCTCCCCCATGAG
GTGTCAGATCTTCTAACAGTGCTTTCCTCTCTAGAAGCCCAGGATCCAAATGATAAAGAA
ACCTGGAGAAGCAGATTTGTCTTGTTGCTCTGGCTTTCCATTGTAGTGATAATACCATTC
CATATGAGTAGACTGGATGGATTTGCCCCTAATGCATCAGGGGCTGGTTCTTCGAAGAAG
TTAACAGTTATGGAGAGAATACTCAATATTTGTAAGACTTATGCATTAAGTAAAGACAGC
TGTGCTGAAGCCAGTGCTTATTTGGCATCAAAGTTTTTAATAAGATCTGATGTTAAAGAG
TTGTACATGAGCCAGTTCTTTGACTGGGCCTGTGAGTTACATTCCAATATACAAGAGGAA
GAAACCATTCATTATGGAGTCCTAGCCGCTGTTGCAGCTGTGTTAAAACATGGCAAACGA
GACGACCTCCTGCCTTTCACCCCTAAGTTACTGGAATGGGTTACCACTCAGAACTACCAG
CAACATAAGGCTATGCTGGTGCGGAAGTATGGTGTCAAGATTGTGCAGAGAATCGGTCTA
ACATTCCTCCGCCCGCGCGTGGCGTCCTGGCGTTACACCCGCGGCGCTCGCTCGCTGGCC
GTCACACTTGGAGCTGCAGCCGCCGGAGACAACGAACCGATGACTGTAGACCCCGATGAT
GACGACCAAGACATACCGCAGGAGGTGGAGGATGTAGTGGAACTGCTCCTTCGTTCTCTT
CGCGATGAAGACACAGTCGTGCGTTGGTCGGCCGCGAAGGGAGTGGGTCGTATCGGAGCG
CGCCTACCCGCCATGGCCGCCGCCGACGTGTGTGACAGTGTACTGACGCTGTTCGCTGAC
AACGAACGCGACACCGCCTGGCACGGGGGCTGTATGGCTCTGGCTGAACTAGGTCGTCGT
GGTCTCATCTCTCCGCGCCAGCTGTCGTCCACGGTCCGTTGCTGTTCAGCGGCCCTGGCT
CGTGACGAGCCCCGCGCGTCAGGCGGAGGTGGCGGCGGCGGTGGTAGGGCTGCCAGAGAC
GCGGCCTGCCATGCTTCCTGGGCCATTGCTAGAGCCTACGACGCGACAGCCCTGACACCG
CACGCTACAGTGCTAGCGAACGCGTTGATAGCCACCGCCTGTTTCGACAGAGAGATAAAC
TGCCGCCGCGCCGCGTCCGCCGCTTACCAGGAGAACGTCGGTCGCCACGGGTTGTTCCCC
CACGGGATCGACGTGCTGACCGCCGCCGACTTCCAGTCCGTGGGTCCGCGGAGCCACGCC
TACCTCGTGGTGGCGCCGTACGTGGCTCGCTACGCCGAGTACACGCGCCCGCTGGTGGAC
CATCTCGTCGATTTGAAATTGGAACACTGGGACTGCGCCATCAGAGAACTGGCCGCGAAG
GCGCTCAGCGAACTCACTAAACAGACACCAGATTACGTGGCGAAGGAGGTTTTACCGAAA
TTAGTGAAGAAGACGGAATCTATTGACCTCAACGTACGCCATGGAGCCATACTGGGTATC
GGTGAGGCGATATACGCTCTCTCTCAGACGGAACTACCCGACGGCGCGAAGGCATCCGTG
TTGATAACAGCTGATGTGTGGCGTGGTGTGCTGGGCGTGCTGGAAGCGCTCCGTGGCCGG
CAACAGCTCCGCGGCCTGGGCGGGGAGCTCATGAGGCAGGCGGCGTGCAACGCGCTCGGC
AGACTAGCCACTGCCGCCGCGCCCATACACTCAGCCGACACGCTCGATGAGTGGCTGAAT
CTGATCGAGGAGTGTCTGTCCCATGAAGTACAGACGATTAGAGAAAAGGCCATCGACGCT
TTGCCGAAAATATTCGAAGAATATCTCAAGGACGATAAAGTCCAATATTCTGAAATCAAC
GCCAAGGAGAAGAGAATGCAACTGGTGCAAAAGTACTGCGAACATTTGAACAGCTCCGGG
GTCAATGGCCTCTTTCTCAGGATGGGATATTCTCGAGCTCTTGGTTCGCTGCCGAAGTTC
GTTTTGTTGGAGAGCATGCAATTAGTCATCGAGTCACTGATACAGTGTACTAAAGTGACA
GAGGCAACCATGAAGTGGGCGGAGGCTCGCCGGGACGCGGTGCTAGGGTTGACGGACGTG
TGTCAAACTGTAGGGCTCCAAGGAGAGATGGAGCGGTATGTGGAGGACGTTAGGACAGCC
CTACTGGACTGTCTGGCGGAGTACACTGTGGACATGAGAGGAGATATAGGAGCCTGGGTC
AGGGAAGCCAGTATGACCGGTCTTGTGTCGCTGTGTAGTCAGTGTTCGTCCCAGGCGCCT
CACTTGAACACGCCCTCGGCGGTCGGAGACACGGCTCGCGGTCTGGCTCAGCAGGCCGTG
GAGAAAATAGACAGGACGAGAGCACACGCCGGGAGGCTCTTCACCGCACTCATCTACAAG
TTAGTACTGTTATTATGA
Protein sequence:
MVALDGDINKDDDCENIGLGCALEHFSEVEDVLNMIENVKNIYNTPTFEVEYDKLYTILK
QYYEQPHLLDPHLDKLLAKFMSIIKDKESPIELKNATFNYMYQIIRVRGYKVVVRHLPHE
VSDLLTVLSSLEAQDPNDKETWRSRFVLLLWLSIVVIIPFHMSRLDGFAPNASGAGSSKK
LTVMERILNICKTYALSKDSCAEASAYLASKFLIRSDVKELYMSQFFDWACELHSNIQEE
ETIHYGVLAAVAAVLKHGKRDDLLPFTPKLLEWVTTQNYQQHKAMLVRKYGVKIVQRIGL
TFLRPRVASWRYTRGARSLAVTLGAAAAGDNEPMTVDPDDDDQDIPQEVEDVVELLLRSL
RDEDTVVRWSAAKGVGRIGARLPAMAAADVCDSVLTLFADNERDTAWHGGCMALAELGRR
GLISPRQLSSTVRCCSAALARDEPRASGGGGGGGGRAARDAACHASWAIARAYDATALTP
HATVLANALIATACFDREINCRRAASAAYQENVGRHGLFPHGIDVLTAADFQSVGPRSHA
YLVVAPYVARYAEYTRPLVDHLVDLKLEHWDCAIRELAAKALSELTKQTPDYVAKEVLPK
LVKKTESIDLNVRHGAILGIGEAIYALSQTELPDGAKASVLITADVWRGVLGVLEALRGR
QQLRGLGGELMRQAACNALGRLATAAAPIHSADTLDEWLNLIEECLSHEVQTIREKAIDA
LPKIFEEYLKDDKVQYSEINAKEKRMQLVQKYCEHLNSSGVNGLFLRMGYSRALGSLPKF
VLLESMQLVIESLIQCTKVTEATMKWAEARRDAVLGLTDVCQTVGLQGEMERYVEDVRTA
LLDCLAEYTVDMRGDIGAWVREASMTGLVSLCSQCSSQAPHLNTPSAVGDTARGLAQQAV
EKIDRTRAHAGRLFTALIYKLVLLL