| New model in OGS2.0 | DPOGS206026 |
|---|---|
| Genomic Position | scaffold35:- 2919-7939 |
| See gene structure | |
| CDS Length | 738 |
| Paired RNAseq reads | 163 |
| Single RNAseq reads | 560 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | peptidoglycan recognition protein long class (AGAP005552-PA) [Anopheles gambiae str. PEST] (6e-12) |
| Best NR hit (blastx) | PREDICTED: peptidoglycan recognition protein 4 [Bos taurus] (1e-08) |
| GeneOntology terms | ND |
| InterPro families | IPR002502 N-acetylmuramoyl-L-alanine amidase domain IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria |
| Orthology group | MCL20779 |
Nucleotide sequence:
ATGCAGTCCTTGATTTCCCCAGTCGATCATGAAACTCGCCAAACCGTTTTTAACACGGAT
GTCGATGGAATAATGGATGAGAACGAGGCGACTCCTCTCCTTCGTCACTTCCATCGTGTT
AGTGCTCGCGGTGTGAATTCCATCACCATCGCCATTATCGCTGGCTTGACTCTGCTGTTC
GTAACAGCTTTGGGCATCGGGATATACCTGCTGGTGGTGCAGAACCATTCCGAAAACGTT
CTGCCACCCGTTAACGTGGAGGAGCCGTATGTGTACGTGTCTCGTTCCGAGTGGGATGAT
GATGCTAAGCCCTCCTCCGAACATTTCAAGGCCCAGCAAGTGGTCTTGCTCCAAACCGAC
ACTCGCCAATGCTGGGATCTTGAAGGATGTCTACTGGTGCTCAAAGATATGAAGGCCGCA
TTGGGACCGAACAGGACTCTGCCCTACAACTTCCTGGTCGCTGACGGAATAGTTTATGAG
AACATCGGATTTCATACTTCGGCCTTGCCTGAGCTATCGGCTATAGTGGTCGCCTTTATA
GGTAATTTCTACCATGTGCCACCTACCATTGAGCAAATTAACACGGCGAAGAATCTCCTG
AGGGCCGCAGTGAAGGATAAGAATTTAGAGGAGTCCTATACTATCATAGGGAAGGCAACC
GATGTGCTACCGAAATTTTTGTTCCGTAGCTTCGAAAATTTGCCCCAATGGAATCGTAAA
TTATCTGATGATTTTTAA
Protein sequence:
MQSLISPVDHETRQTVFNTDVDGIMDENEATPLLRHFHRVSARGVNSITIAIIAGLTLLF
VTALGIGIYLLVVQNHSENVLPPVNVEEPYVYVSRSEWDDDAKPSSEHFKAQQVVLLQTD
TRQCWDLEGCLLVLKDMKAALGPNRTLPYNFLVADGIVYENIGFHTSALPELSAIVVAFI
GNFYHVPPTIEQINTAKNLLRAAVKDKNLEESYTIIGKATDVLPKFLFRSFENLPQWNRK
LSDDF