| New model in OGS2.0 | DPOGS209154 |
|---|---|
| Genomic Position | scaffold521:- 20351-25446 |
| See gene structure | |
| CDS Length | 975 |
| Paired RNAseq reads | 241 |
| Single RNAseq reads | 1440 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011471 (3e-70) |
| Best Drosophila hit | couch potato, isoform J (7e-58) |
| Best Human hit | RNA-binding protein with multiple splicing isoform B (8e-28) |
| Best NR hit (blastp) | PREDICTED: similar to Protein couch potato [Nasonia vitripennis] (2e-91) |
| Best NR hit (blastx) | PREDICTED: similar to RE20544p [Acyrthosiphon pisum] (2e-61) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0005634 nucleus GO:0007422 peripheral nervous system development GO:0000166 nucleotide binding GO:0003676 nucleic acid binding GO:0009987 cellular process GO:0007268 synaptic transmission GO:0042048 olfactory behavior |
| InterPro families | IPR012677 Nucleotide-binding, alpha-beta plait IPR000504 RNA recognition motif domain |
| Orthology group | MCL10808 |
Nucleotide sequence:
ATGGGGAATTCCCGTGCGTTCGACCGGAAAATAGCCGACATAAAGGTGCGGACGTTGTTT
GTTAGCGGACTGCCAATGGACGCGAAGCCTCGTGAACTTTACTTGCTTTTCCGAGCATAC
GAAGGCTACGAAGGTTCTTTGCTGAAAGTCACGAGCAAAAATGGAAAAACTGCCTCTCCG
GTTGGGTTCGTCACATTTCACACCAGAGCTGGTGCAGAGGCAGCAAAGCAAGATCTTCAG
CAGGGTGTCCGGTTCGACCCCGACATGCCGCAAACCATTCGGCTGGAGTTCGCTAAAAGC
AACACGAAGGTCAGCAAGCCGAAGCCGGCAGTTGCCACAGCCGCGCCAGCTGCACACCCT
GCATTGATGCACCCACTCACTGGACACTTAGCTAGTCCCTTCTTCCCTGGAGGAGGCGCT
GAACTGTGGCACCACCCGTTAGCTTACGGCGGTGAGCTGCCGACTCTCTCGCACGGGCTG
GTCCATCCCGCCATCCATCCTCAAATGGCGCCCACCCCTTTGACTCTCGGAGCGTGCGTG
CTGCCCGCGCCAGCCCTGGGCTCGCCGGGGGCGTCAGTTCCGCCCCCAGCGCACCCCTCG
CATCCTCAGCACCCCTCGCACCCAGCTCATCCAGGCCATCAAGCTCATCCAGCTCATACC
GCGCCCTGTTCCACGCTGTTCGTCGCGAACCTGGGACAGTTCGTGTCGGAACATGAGCTC
AAGGAGATATTCAGCAGCTGCTCGGGTTTCAACCGCCTGAGGCTGATGACGGGCGGAAAT
GGGCCGGTGGCGTTTGTGGAGTTCGCCACTACGAGGGACGCCGCCGCCGCCCGAGCCTCC
CTCCAAGGCGCGCTCCTCCTCAGCTCGGAGTCCGCCCTCCAGCTGGAGTACGCCCGCCAC
AAGTCGCCGCACACCTGGATACTAGCATATGAAGTATGCACGATACCTCACGGATTCATA
TATCGCGTCGCATAA
Protein sequence:
MGNSRAFDRKIADIKVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP
VGFVTFHTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKPAVATAAPAAHP
ALMHPLTGHLASPFFPGGGAELWHHPLAYGGELPTLSHGLVHPAIHPQMAPTPLTLGACV
LPAPALGSPGASVPPPAHPSHPQHPSHPAHPGHQAHPAHTAPCSTLFVANLGQFVSEHEL
KEIFSSCSGFNRLRLMTGGNGPVAFVEFATTRDAAAARASLQGALLLSSESALQLEYARH
KSPHTWILAYEVCTIPHGFIYRVA